EST details — SGN-C14170

Search information 
Request: 14170Match: SGN-C14170
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C14170Clone name: cLEC-7-B2
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C172864 is on microarray TOM1: SGN-S1-1-3.3.20.3
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C172864 [TUS-14-K6] Trace: SGN-T195394 EST: SGN-E394068 Direction: 5' Facility: INRA
Clone: SGN-C172864 [TUS-14-K6] Trace: SGN-T195687 EST: SGN-E394361 Direction: 5' Facility: INRA
Clone: SGN-C172864 [TUS-14-K6] Trace: SGN-T195687 EST: SGN-E399076 Direction: 5' Facility: INRA
Clone: SGN-C172864 [TUS-14-K6] Trace: SGN-T195792 EST: SGN-E394466 Direction: 3' Facility: INRA
Clone: SGN-C172864 [TUS-14-K6] Trace: SGN-T195792 EST: SGN-E399075 Direction: 3' Facility: INRA
Clone: SGN-C172864 [TUS-14-K6] Trace: SGN-T199456 EST: SGN-E398130 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E202191Length: 466 bp (977 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E202191 [] (trimmed) GAGCAATATCATACAGCTAAAGGAGAAAAGAAGAAGAGATTTTGTTACAAAAATATGGAACGAATTTCCTTAGCAAACAGTTACACACAGGTGAT
GATACATGCAAGAGCTTCTGATACTACAGTTGCACATCTTGCATAATATACAAGTATGGAAGCTCATATGAGTATAAAACTACAAGCTTTTCATG
TCAAAATGTTACATTTGATTATACAGGGGGAAAAGGGATGCACTAATTACTTTATTTCTCCCGCACCACTTTATATCTTGATGGCACAGATAACT
CAACCATTTACACCTACAATTACGCTCACAGGAACTGCAGATAATGCTCATCCCTTGTTTGCATAAACAGACACATGTTAACTTCCTCAGGTGAT
TAATTAATGGTGTTTTCCCTCTGTAATTTAGGAATCACCACACTAAGCCCTTTCTTCTCCTAAACCTGTCAACACGATCTGTGCTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E202191] SGN-U575206 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T25473 [Download] [View] Facility Assigned ID: TCABB01TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.943 Expected Error Rate: 0.0158 Quality Trim Threshold: 14.5