EST details — SGN-C15459

Search information 
Request: 15459Match: SGN-C15459
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C15459Clone name: cLED-11-P4
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175549 is on microarray TOM1: SGN-S1-1-6.3.13.12
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175549 [TUS-21-K3] Trace: SGN-T190344 EST: SGN-E377153 Direction: 3' Facility: INRA
Clone: SGN-C175549 [TUS-21-K3] Trace: SGN-T190345 EST: SGN-E377154 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E235592Length: 619 bp (789 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E235592 [] (trimmed) CTCACTTCGGCGGCAAACGCAGTGCAGAGGAAAAGAGTGCCTTGCCGAAATGGTGACGTACAAGTTCCATCAGTATCAGGTTGTCGGGAGAGCTT
TGCCCACCGAAACAGATGAACATCCCAAGATTTATCGTATGAAGTTGTGGGCTACAAATGAAGTTCGTGCGAAGTCCAAATTCTGGTATTTCTTG
AGGAAGCTTAAGAAGGTGAAGAAGAGCAACGGTCAGATGCTGGCTATTAATGAGATCTTCGAGAAGAACCCAACAACAATTAAGAATTATGGTAT
TTGGCTCCGTTACCAGAGTAGAACGGGATACCACAACATGTACAAGGAGTACCGTGACACCACATTGAATGGTGGTGTGGAGCAGATGTACATTG
AGATGGCTTCTCGCCACAGAGTTCGCCATCACTGCATCCAGATCATAAAGACCGCAACCATTCCGGCTAAGCTGTGCAAGAGGGAGAGCACAAAG
CAGTTCCATGACTCCAAGATCAAGTTCCCCTTGGTGTTCAAGAAAGTCAGGCCACCATCTAGGAAACTCAAGACCACATACAAGGCTACTAAGCC
CAACTTGTTCATGTAACTTGTTTGGTCATATGTGCATTGAGAAGCAACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E235592] SGN-U578490 Tomato 200607 Build 2 32 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T51602 [Download] [View] Facility Assigned ID: TOVBR86TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.981 Expected Error Rate: 0.0054 Quality Trim Threshold: 14.5