EST details — SGN-C17062

Search information 
Request: 17062Match: SGN-C17062
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C17062Clone name: cLED-18-H7
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C186171 is on microarray TOM1: SGN-S1-1-8.1.5.19
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E237980Length: 619 bp (858 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E237980 [] (trimmed) GGGCCATGCATGTAAAACATGGGGAATATTTCAAGTTGTTAATCATGGAATTTCTTTAAAATATTTTGATGAAGTTGAATCTCAGGCAAGGCGAC
TTTTTGCCTTGCCTACTGAACAAAAGGTGAAGGTCGTAAGATCAACTAATGGTGTCACCGGCTATGGCACAGCTCGAATTACGCCGTTTTTCTCA
AAGTTCATGTGGCATGAAGGGTTCACAATTGTGGATTCACCACTTGATCATGCTAAGGAACTTTGGCCAAATGACTATAAGAAATTTTGTGATGT
GATGGAAAATTATCAAACGAAGATGAAAGTTCTATCCTTCCAACTCTGCATGTTCATCCTCAACTACTTACAACCATCTCATGAACATTCAATTA
ATTCATTTGAATTTGAAGGAGCCCTACAGTTAAATTCATATCCATGTTGTCCTAACCCTTACCACGCACTGGGGTTAGCTCCTCACACAGATTCC
TTATTCCTAACAATACTCCATCAAACAAATAATACAAAGGGTCTTCAAATCTTGAAAAAAGACCAAGGATGGACTTCAATTGCTCCGGTTTCCAA
CGATGCCCTCATTGTTAATGTAAGCGATCTTCTTCATATACTCTCTAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E237980] SGN-U574683 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T53283 [Download] [View] Facility Assigned ID: TOVCS40TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0031 Quality Trim Threshold: 14.5