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EST details — SGN-C17607

Search information 
Request: 17607Match: SGN-C17607
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C17607Clone name: cLED-1-H2
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C183974 is on microarray TOM1: SGN-S1-1-5.2.19.18
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C17607 [cLED-1-H2] Trace: SGN-T48528 EST: SGN-E227016 Direction: 3' Facility: TIGR
Clone: SGN-C183974 [TUS-43-J4] Trace: SGN-T199924 EST: SGN-E398598 Direction: 5' Facility: INRA
Clone: SGN-C183974 [TUS-43-J4] Trace: SGN-T199949 EST: SGN-E398623 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E227015Length: 391 bp (800 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E227015 [] (trimmed) GTGGGAGTATACCTTCTTCAATATCGAACTTGACTCATTTGACTGCTCTAGTTCTTGCTAATAACTCGCTTTTTGGCAGTATTCCTGATCTCAAT
CTCCCTACTTAGCAAATATTAGATCTGTCCAACAATAACTTCACTGGAAGTATCCCCAATTCTCTTCAAAGATTTCCTGGTTCAGCTTTTGCTGG
TAACCCGCTTTCTCCTGCAAATTTTTCACCTTCATTTCCTCCAGTTCCTCCTCCAAGTGTCCCACCAAAAAAGAAATCGTTTAAACTCCGTGAAC
CTGCAATACTTGGGATTGTAATGGGAGGATGTGTTTTAGGTTTCTTAGTGGTAGCTGCAGTGCTAATTATGTGCTTTTCAAAGAAAGAGGGTAAC
AGTGGGGCCAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E227015] SGN-U582035 Tomato 200607 Build 2 16 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T48527 [Download] [View] Facility Assigned ID: TOVAD37TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0011 Quality Trim Threshold: 14.5