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EST details — SGN-C1772

Search information 
Request: 1772Match: SGN-C1772
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C1772Clone name: cLEC-13-N22
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C173172 is on microarray TOM1: SGN-S1-1-7.4.20.14
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C173172 [TUS-15-H2] Trace: SGN-T189001 EST: SGN-E375387 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E204292Length: 519 bp (913 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E204292 [] (trimmed) CCTTCCCCCCTCTCTCTCTCTCTAGATCACCAGTTTGCATTCTTTCTCTCTCTAAACCTCAAAAAGTTTCAATTTTTCAGCAAATGGACTCTTCA
GATGATGAGGGTGAGGAGTATCTTTTCAAGATTGTAATCATTGGTGATTCTGCAGTAGGTAAATCTAATTTGCTTACACGTTATGCAAGAAATGA
GTTTAATTTGCATTCAAAAGCAACTATTGGAGTTGAGTTTCAGACCCAAACTCTTGAAATTGATGGAAAAGAAGTTAAAGCTCAGATTTGGGATA
CTGCTGGACAAGAAAGGTTTAGAGCTGTGACTTCTGCTTATTATCGTGGTGCTTTTGGTGCTCTTGTTGTTTATGATATTTCAAGAAGGACAACT
TTTGATAGTATCCCTCGTTGGCTTGATGAACTCAAAACTCATTCGGATACAACGGTTGCAAGGATACTGGTGGGAAACAAATGTGACTTGGAGAA
TATAAGAGCTGTGAGCGTAGAAGAAGGCAAAAGCCTGGCAGAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E204292] SGN-U564991 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T26045 [Download] [View] Facility Assigned ID: TCABZ83TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0028 Quality Trim Threshold: 14.5