EST details — SGN-C17813

Search information 
Request: 17813Match: SGN-C17813
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C17813Clone name: cLED-20-O15
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C182226 is on microarray TOM1: SGN-S1-1-1.1.8.13
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C182226 [TUS-39-A8] Trace: SGN-T194760 EST: SGN-E393434 Direction: 5' Facility: INRA
Clone: SGN-C182226 [TUS-39-A8] Trace: SGN-T194760 EST: SGN-E399499 Direction: 5' Facility: INRA
Clone: SGN-C182226 [TUS-39-A8] Trace: SGN-T194761 EST: SGN-E393435 Direction: 5' Facility: INRA
Clone: SGN-C182226 [TUS-39-A8] Trace: SGN-T199376 EST: SGN-E398050 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E236197Length: 545 bp (909 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E236197 [] (trimmed) CTTTTTTTTTAAAAAAAAATGGTTGTTAATAATAATTCCAATCACCTCCCTCCTGGATTTAGGTTTCATCCAACAGATGAGGAATTAATCATGTA
TTATCTTCGAAATCAAGCTACCTCCAAGCCTTGTCCATCTTCAATCATCCCCGAAGTTGATGTCTATAAGTTCGATCCCTGGGAATTGCCTGAAA
AAACTGAATTTGGAGAAAAAGAATGGTATTTCTTCACCCCACGTGATAGAAAATATCCAAATGGTGTTAGGCCAAATAGGGCAGCTGTGTCTGGT
TATTGGAAAGCCACAGGCACAGATAAAGGTATATATAGTGGAACAAAATATGTTGGTATTAAAAAAGCTCTTGTATTTTATAAAGGAAAACCCCC
TAAAGGTATCAAGACTGATTGGATCATGCATGAATATAGATTGAGTGAATCAAGGACTCAACCAACTAGGCCAAATGGATCCATGAGGTTGGATG
ATTGGGTACTTTGTAGAATTTATAAGAAGAAGAATTTGGAAAGAGCTATAGAGATGATGAAAGTTGAAGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E236197] SGN-U566037 Tomato 200607 Build 2 24 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T53714 [Download] [View] Facility Assigned ID: TOVCY92TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.948 Expected Error Rate: 0.0063 Quality Trim Threshold: 14.5