EST details — SGN-C1920

Search information 
Request: 1920Match: SGN-C1920
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C1920Clone name: cLEC-14-E4
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C173248 is on microarray TOM1: SGN-S1-1-3.3.20.15
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C173248 [TUS-15-K6] Trace: SGN-T188746 EST: SGN-E375892 Direction: 3' Facility: INRA
Clone: SGN-C173248 [TUS-15-K6] Trace: SGN-T188747 EST: SGN-E375893 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E204633Length: 129 bp (855 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E204633 [] (trimmed) TGCTTACAGCCTTAAACATGACAGTTACAACGGACAACTGGAAGGTAACTGTAACAGAAAGGAGATTAGAATTTGCAAGTATAAAGGGCAACGGA
GTTGAGTTTTTTTTTTTTTATCAACAAAATCAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E204633] SGN-U577884 Tomato 200607 Build 2 29 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T26249 [Download] [View] Facility Assigned ID: TCACB26TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.904 Expected Error Rate: 0.0290 Quality Trim Threshold: 14.5