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EST details — SGN-C1930

Search information 
Request: 1930Match: SGN-C1930
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C1930Clone name: cLEC-14-F13
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C173253 is on microarray TOM1: SGN-S1-1-6.3.20.19
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C173253 [TUS-15-K11] Trace: SGN-T188597 EST: SGN-E374953 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E204844Length: 495 bp (914 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E204844 [] (trimmed) GTGCCATTGACTACATGGGACTTTGCTGCACATGTGCTGGCACAATGATGGTTGCGGCATCAGCTAGCACATTAAATCAGGTGTTTGAGGTGAAA
AATGATGCTAAGATGAACAGAACCAAGAAAAGACCATTGCCGTCAGGACGAATCAGTATACCCCATGCAGTAACATGGGCAGCTTCTATTGGCAT
CCTGGGCACTGGTTTACTGGCTAGCAAGGCTAATATGTTGGCAGCTGGCCTTGGTGCGTCGAATCTTGTGTTGTATGCATTTGTATACACACCAC
TAAAGCAGATACATCCAATTAATACATGGGTCGGCGCAATTGTTGGAGCTATTCCTCCCCTGCTTGGGTGGGCTGCAGCTTCTGGTCAGGTGTCT
CTCAATGGAATGCTCCTCCCAGCTGCTCTGTATTTTTGGCAAATACCTCATTTCATGGCCTTAGCCTACTTGTGTCGTAAAGATTATGCTGACGG
AGGGTTCAGAATGTACTCTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E204844] SGN-U575161 Tomato 200607 Build 2 23 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T26460 [Download] [View] Facility Assigned ID: TCACC31TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0097 Quality Trim Threshold: 14.5