EST details — SGN-C2106

Search information 
Request: 2106Match: SGN-C2106
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C2106Clone name: cLEC-14-N15
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C173350 is on microarray TOM1: SGN-S1-1-5.3.20.20
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C173350 [TUS-15-O12] Trace: SGN-T188684 EST: SGN-E375830 Direction: 3' Facility: INRA
Clone: SGN-C173350 [TUS-15-O12] Trace: SGN-T188685 EST: SGN-E375831 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E204864Length: 513 bp (937 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E204864 [] (trimmed) AAAAAAGCAAAGCTGCTGTTGGAAGTACGAACTTGTTCTCCCTTAAGACTTTCCTTTCTCCTAAACCCTACACCATTGATTCTTTAGGACCAAAT
CTACGATGCTGGGCGTTTTAAGGCGCAAGGTTGCTTCTGCTTCGGGTTTAGGGAAATCTATGTATGCAGTTCGACCTACCTCTAGAATTTCATCT
ACTGCAACTGAAGAGATATTACTTCTTCCTATACAATGCGGTCATGCTCGGCAATTCAGTCATCTTGTTTTACCTGGATGCTCAGTGAACATGAG
GCCAGATAGGGGAGCTGTGGTTAATTTTCACTCAAGTCTATCACAACAGATTTGCATCAGGCCTTTTTGTTCAAATAGTGGTGATCTGGTCGATG
CTGTTGTTCCTTATATGGGCGAATCCATAAGCGATGGCACACTGGCTAAATTGCTGAAGAATCCTGGTGACAAAGTAGAAGTTGATGAGCCAATT
GCTCAGATTGAAACAGACAAGGTAACAATTGATGTAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E204864] SGN-U568072 Tomato 200607 Build 2 67 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T26480 [Download] [View] Facility Assigned ID: TCACC80TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0062 Quality Trim Threshold: 14.5