EST details — SGN-C21154

Search information 
Request: 21154Match: SGN-C21154
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C21154Clone name: cLED-31-N13
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C181567 is on microarray TOM1: SGN-S1-1-4.1.12.10
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C181567 [TUS-37-E21] Trace: SGN-T194298 EST: SGN-E392972 Direction: 3' Facility: INRA
Clone: SGN-C181567 [TUS-37-E21] Trace: SGN-T194299 EST: SGN-E392973 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E242948Length: 619 bp (906 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E242948 [] (trimmed) CTCGTTTCCTCCGAACAAGCCCTTTTCTCTCTTCAAGCCTTCTTCACAAGTCTTGAAGAGCCTAAATTTGGATCTTTTTTGGTTCTTGTTTGTTC
GTAAATGGCTAAGGTCTACACTTTGGCTGAGGTCTCCCAGCACAACAGCGCTAAGGATTGTTGGTTGGTTATTAATGGCAAGGTATATGATGTGA
CAAGATTCTTGGATGATCACCCTGGAGGTGATGAGGTTCTCATATCTTCAACTGGAAAGGATGCGACTGATGATTTTGAGGATGTAGGCCACAGC
AGCAGTGCTCGAGCAATGTTGGATGAGTACTATGTAGGTGATATTGATTCAGCAACCATTCCGACCAAAACCAAGTATACTCCTCCCAAGCAGCC
TCAGTACAATCAGGACAAAACATCAGAGTTTGTCGTCAAGCTCCTCCAGTTCTTAGTTCCCCTGATTATTTTGGGTGTGGCTTTTGGCATCCGCT
TCTATACCAAACAGTCAGCAGCTTGAAGATGGAGTTCATGGGGAATACATAGTTAAGTGTCGAAGAGAGAGCCCAAAAATAGTTTGGGGGTGGGT
GAGGCTCTTTGTCATCTGAGCAAGTCTTTTGGTTAAATTATAGGGATAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E242948] SGN-U576180 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T56867 [Download] [View] Facility Assigned ID: TOVES79TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0110 Quality Trim Threshold: 12.5