EST details — SGN-C23277

Search information 
Request: 23277Match: SGN-C23277
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C23277Clone name: cLED-4-P20
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C174598 is on microarray TOM1: SGN-S1-1-5.3.15.8
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C174598 [TUS-19-C12] Trace: SGN-T189305 EST: SGN-E376691 Direction: 3' Facility: INRA
Clone: SGN-C174598 [TUS-19-C12] Trace: SGN-T189306 EST: SGN-E376692 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E231781Length: 488 bp (759 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E231781 [] (trimmed) AAGCTCTTGGTGAAATTAGGCCTTCCAGAGTAGAGGTGCATTTCATTGTCGCAGCATGTGAAAATATGATCAGTGCAGAAGGCATGAGGCCTGGA
GACATTGTCACAGCTTCAAATGGTAAGACAATTGAGGTTAACAATACTGATGCTGAGGGTAGGCTCACACTTGCTGATGCTTTGATATATGCCTG
TAACCAAGGTGTTGAGAAGATAATTGATCTGGCAACATTAACTGGTGCTATTATGGTTGCTCTTGGACCTTCAGTTGCTGGTGCTTTTACACCTA
ATGATGACCTAGCAAGGGAGGTTGTTGAAGCTGCTGAGGCAAGTGGTGAAAAACTATGGAGGATGCCTATGGAGGAGAGTTACTGGGAGAGTATG
AAATCAGGAGTGGCTGATATGATTAACACGGGGCCTGGTAATGGCGGTGCTATAACTGGTGCTCTCTTCCTCAAACAATTTGTTGACGAGAAGGT
TCAGTGGTTGCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E231781] SGN-U577971 Tomato 200607 Build 2 134 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T49550 [Download] [View] Facility Assigned ID: TOVAP94TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.948 Expected Error Rate: 0.0095 Quality Trim Threshold: 14.5