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EST details — SGN-C23761

Search information 
Request: 23761Match: SGN-C23761
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C23761Clone name: cLED-6-E20
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C174930 is on microarray TOM1: SGN-S1-1-1.1.14.19
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C174930 [TUS-20-A8] Trace: SGN-T189808 EST: SGN-E377597 Direction: 3' Facility: INRA
Clone: SGN-C174930 [TUS-20-A8] Trace: SGN-T189809 EST: SGN-E377598 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E232962Length: 655 bp (761 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E232962 [] (trimmed) GCGTTTGAAGCGTCTTAAAATATTAAACGTAAGGTGGAATAAGCTGCAAGATGTCATTCCACCTGAAATAGGTGAACTAAAGCAGCTAACACATC
TCTACCTAAGTTTTAATAATTTCAAAGGCGAAATACCTAAGGAGCTTGCTAATCTTCCTGAGCTTCGTTATCTCCATCTGCATGAAAATCATTTT
ATTGGAAGAATTCCACCTGAGCTGGGTTCCTTACAGTATCTTCGACACCTGGATGTTGGTAACAATCGTTTGGTTGGAACTATAAGAGAACTCAT
ACGTATTGAAGGATGTTTTCCAGTTCTCCGCAACCTATACTTGAACAATAATTATCTTACTGGAGGCATTCCAGCGCAACTTGCTAATCTGACGA
ACTTGGAGATCTTGTATCTATCCTACAACAAGATGACAGGAGTTATACCATATAGCATTGCTCATATTCCTAAGTTAACTTACTTGTATCTCGAT
CACAATCAATTTTCTGGGAGGATTCCAGATGCCTTCTACAAACACCCTTTCTTGAAGGAAATGTACATTGACGAGAACACATTCCGGCCTGGTGT
AAAACCAATCGGCCTGCATAAAGTGCTAGAACTTTCAGACGCAGATTTCCTTGTTTAGAAAAAGCCAAGTACTGTTATTTATTCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E232962] SGN-U576711 Tomato 200607 Build 2 54 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T49948 [Download] [View] Facility Assigned ID: TOVAV34TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0029 Quality Trim Threshold: 14.5