EST details — SGN-C23961

Search information 
Request: 23961Match: SGN-C23961
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C23961Clone name: cLED-6-M9
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175109 is on microarray TOM1: SGN-S1-1-6.4.13.7
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175109 [TUS-20-H19] Trace: SGN-T190058 EST: SGN-E377559 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E233236Length: 537 bp (767 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E233236 [] (trimmed) GATTCTCATCAACGTTCTACAGCCATCCACCACCTCACCAAAGCTTGTCAAGGTTGGGGCTTCTTCATGGTAGTGAACCACGGCATACCAGAAAA
TCTGATGAAGTCAGTGATTGATTGCACTCATGAATTTTTCAATTTACCAGAGGAAGAAAAACACAAGTTTACTGGGAAGCATGTGTTGGATCCTA
TAAGATATGGGACAAGTTTCAATACTAGTACAGAAAATGTCTTCTTTTGGAGAGATTTTCTCAAGGTCTTTGTCCATCCTCATTTTCACTCTCCC
ACCAAACCACAAACCTACAGGGGTATTATGTCGGAGTATAGTGAGAAACTCCGGGAAGTGACAAGAAAGTTACTAGGAGGCATATCTGAAAGTTT
AGGGCTTGAAGAAAGTTACTTGGAGAAAGATTTAGAGTTGGAATCAGGGCTTCAAATCTTCGTTGGAAATTACTATCCACCTTGTCCTCAACCTG
AACTAGCAATGGGTATGCCACCTCATTCAGATCAAGGCCTTTTAACACTTCTCATTCATAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E233236] SGN-U579869 Tomato 200607 Build 2 86 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T50222 [Download] [View] Facility Assigned ID: TOVAU77TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.970 Expected Error Rate: 0.0025 Quality Trim Threshold: 14.5