EST details — SGN-C26622
| Search information |
| Request: 26622 | Match: SGN-C26622 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C26622 | Clone name: cLEF-41-B15 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176379 is on microarray TOM1: SGN-S1-1-8.1.10.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176379 [TUS-23-M17] | Trace: SGN-T181011 | EST: SGN-E369437 | Direction: 3' | Facility: INRA |
| Clone: SGN-C176379 [TUS-23-M17] | Trace: SGN-T181012 | EST: SGN-E369438 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E246876 | Length: 403 bp (956 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E246876 [] (trimmed)
GAAAAGGTTCCCTGTGTGGAGGATTTTGAATTGAAGGCTATGAATCCTTATGGTCGAACAAAGCTATTTCTTGAAGATATTGCACGGGATATCCA
GAAGGCTGATCAAGAATGGAATATCATACTGTTGAGGTATTTCAACCCGGTAGGAGCTCATGAAAGTGGCAAACTCGGGGAAGAATCCAAAGGGC
ATTCCGAACAATCTTATGCCTTACATTCAGCAAGTAGCTGTTGGTAGATTGCCGGAGTTGAATGTATATGGCAACGACTACCCTACACCTGATGG
TACCGCGATACGAGATTATATCCATGTTATGGATTTGGCGGACGGTCATGTTGTTGCACTTCAGAGACTTCTAAGGCAGAATCACATAAGTTGTG
TTGCCTACAATTTGGGTACTGGA
GAAGGCTGATCAAGAATGGAATATCATACTGTTGAGGTATTTCAACCCGGTAGGAGCTCATGAAAGTGGCAAACTCGGGGAAGAATCCAAAGGGC
ATTCCGAACAATCTTATGCCTTACATTCAGCAAGTAGCTGTTGGTAGATTGCCGGAGTTGAATGTATATGGCAACGACTACCCTACACCTGATGG
TACCGCGATACGAGATTATATCCATGTTATGGATTTGGCGGACGGTCATGTTGTTGCACTTCAGAGACTTCTAAGGCAGAATCACATAAGTTGTG
TTGCCTACAATTTGGGTACTGGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E246876] | SGN-U564745 | Tomato 200607 | Build 2 | 49 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60291 [Download] [View] | Facility Assigned ID: TMGGG08TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.981 | Expected Error Rate: 0.0116 | Quality Trim Threshold: 14.5 |
Working
