EST details — SGN-C26739
| Search information |
| Request: 26739 | Match: SGN-C26739 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C26739 | Clone name: cLEF-41-G7 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176433 is on microarray TOM1: SGN-S1-1-2.3.10.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176433 [TUS-23-O23] | Trace: SGN-T181104 | EST: SGN-E369530 | Direction: 3' | Facility: INRA |
| Clone: SGN-C176433 [TUS-23-O23] | Trace: SGN-T181105 | EST: SGN-E369531 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E246809 | Length: 592 bp (916 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E246809 [] (trimmed)
GTTTACTCATCTATGATTAGAGGTTTTGGTAAAGATAAGAAACTGAACTCTGCTATGGCACTTGTCGAGTGGTTAAGGAGGAGGAGGGGCAAGGA
CAATATTGGCTCTATTAGCTTAAATGTGTTCATTTATAACAGTCTTTTAGGTGCCATAAAAGAGGCGGGGAAGTATGATTTTGTTGATAAAGTCA
TGGATGATATGGTTTCAGAAGGAGTGCAGCCTAATGTTGTGACGTACAATACTTTAATGAGAACTTATATAGAACAAGGTCGGGAACTTGAAGCT
CTCAAACTTTTCAGGGAGATGCCAAAGAAGGGACTCACTCCTAGTCCTGCATCCTATTCCACTGCCTTGTTTGCTTATCGGAGACTTGAAGATGG
ATTTGGTGCTATAACTTTCTTTGTCGAGACACGAGAGAGATATCAAAATGGTGAAATAGGAAATATTGAGGAAGAAAACTGGGAGGATGAATTTG
CCAAGCTTGAGAATTTCATAGTTCGAATTTGCTACCAGGTGATGCGGCAGTGGCTGGTAAAGGGTGAAAATGCAAACACCAATGTTCTGAAACTA
CTAACGGATATGGATAGGGCTA
CAATATTGGCTCTATTAGCTTAAATGTGTTCATTTATAACAGTCTTTTAGGTGCCATAAAAGAGGCGGGGAAGTATGATTTTGTTGATAAAGTCA
TGGATGATATGGTTTCAGAAGGAGTGCAGCCTAATGTTGTGACGTACAATACTTTAATGAGAACTTATATAGAACAAGGTCGGGAACTTGAAGCT
CTCAAACTTTTCAGGGAGATGCCAAAGAAGGGACTCACTCCTAGTCCTGCATCCTATTCCACTGCCTTGTTTGCTTATCGGAGACTTGAAGATGG
ATTTGGTGCTATAACTTTCTTTGTCGAGACACGAGAGAGATATCAAAATGGTGAAATAGGAAATATTGAGGAAGAAAACTGGGAGGATGAATTTG
CCAAGCTTGAGAATTTCATAGTTCGAATTTGCTACCAGGTGATGCGGCAGTGGCTGGTAAAGGGTGAAAATGCAAACACCAATGTTCTGAAACTA
CTAACGGATATGGATAGGGCTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E246809] | SGN-U566309 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60224 [Download] [View] | Facility Assigned ID: TMGGE40TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.960 | Expected Error Rate: 0.0075 | Quality Trim Threshold: 14.5 |
Working
