EST details — SGN-C26965

Search information 
Request: 26965Match: SGN-C26965
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C26965Clone name: cLEF-42-C12
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C183207 is on microarray TOM1: SGN-S1-1-4.2.3.6
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C183207 [TUS-41-J5] Trace: SGN-T195185 EST: SGN-E393859 Direction: 5' Facility: INRA
Clone: SGN-C183207 [TUS-41-J5] Trace: SGN-T195344 EST: SGN-E394018 Direction: 3' Facility: INRA
Clone: SGN-C183207 [TUS-41-J5] Trace: SGN-T200436 EST: SGN-E399510 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E247704Length: 600 bp (994 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E247704 [] (trimmed) GAAACAGCCAAAAGGTAACACAATAGATTTGTATTCAATACCCCTTGCCAATTTAAGCATAAACAGTTCCACAACCATACACATCTGGGAAAAAC
TAATATTACTCATATCCTTTTTCAGAAAACTATAATTACATTAAAGCATCATCAGTTTCAGCTTCATCACCAATGTAAATGTATATACGTATATA
AACTTATGAACCCCTAAACAGAACTTATTGACAACTTAGTAGTAACGAATGAGCCATGTAAATGCTTGTCACACTAGAGTTGTGTGTTATGCTTG
CTCTGCCCTGCTCATGTGGCACATCATATATATACTCTAATCATATAATCCATCCACATACGCCACGCCAGTAGACCTCAACCATGATCCGCCCT
GAATCAGCTTAGCCACAGTGAACGGCATAGCTTTAGCGGGATCAGTAATGACATGATAACCAGGCCACTTGACACGCTTACTAGTACCAGCACCA
GGTCCATTGTTCATAAATTCACCATAATACAATGTCTTCAACGCAAAATCTCCGTCCCACTCAGCCCAACCCGCTGGATTAATGAGACCACCTAA
GTATGATTCCATCACTACAGTTCTTGAATA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E247704] SGN-U563074 Tomato 200607 Build 2 161 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T60748 [Download] [View] Facility Assigned ID: TMGGJ18TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0074 Quality Trim Threshold: 14.5