EST details — SGN-C27178

Search information 
Request: 27178Match: SGN-C27178
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C27178Clone name: cLEF-42-M20
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C176645 is on microarray TOM1: SGN-S1-1-6.4.9.19
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176645 [TUS-24-H19] Trace: SGN-T193134 EST: SGN-E391808 Direction: 3' Facility: INRA
Clone: SGN-C176645 [TUS-24-H19] Trace: SGN-T193135 EST: SGN-E391809 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E247553Length: 450 bp (1002 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E247553 [] (trimmed) GCAAAAACATTTGTATTCTATACCTTTTCTGGATGACAAAGAAATGGTGGAATTGCAATTTCCTGCTGGATTTCGATTCCATCCAACTGATGAAG
AGCTTGTGATGCATTATTTATGTCGAAAATGCGACGCACAGCCAATTGCTGTTCCGATTATAGCTGAAATTGATCTCTACAAGTACAATCCATGG
GATCTACCTGATTTGGCTTTGTATGGTGAGAAAGAGTGGTATTTCTTTTCGCCGAGAGATCGGAAGTTTTCCAACGGATCACGGCCGAACCGAGC
TGCGGGGAGTGGATACTGGAAGGCGACGGGTGCGGATAAGCCGATTGGTCGTCCAAAGTCGATGGGAATTAAGAAAGCTTTGGTGTTTTACGCAG
GAAAAGCTCCGAAGGGTGAAAAAACAAATTGGATTATGCACGAATATCGACTTGCTCATGTTGATCGATC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E247553] SGN-U568605 Tomato 200607 Build 2 64 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T60597 [Download] [View] Facility Assigned ID: TMGGJ82TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0217 Quality Trim Threshold: 14.5