EST details — SGN-C27240

Search information 
Request: 27240Match: SGN-C27240
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C27240Clone name: cLEF-42-P18
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C176683 is on microarray TOM1: SGN-S1-1-8.2.9.16
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176683 [TUS-24-J9] Trace: SGN-T193139 EST: SGN-E391813 Direction: 5' Facility: INRA
Clone: SGN-C176683 [TUS-24-J9] Trace: SGN-T193386 EST: SGN-E392060 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E247646Length: 637 bp (1000 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E247646 [] (trimmed) CTCCGGTGATACTATTCGGGTGCCAAAAGCTGGTCATGCTGGCAGGCGAGGGGTGCAGCCAGGCAGCTTATTTATAAAGCTAAAGGTTGCTAAAG
ATCCTCTATTTGCTAGAGAAGGAGCTGACCTTTATGTAGATTATCATATCAGCTTTACAAAAGCTATCCTTGGTGGTAAAGTTGAGGTACCAACT
CTATCTGGAAAGACAAATATACAGGTACCCAAGGGTGTTCAGCCTGGACAACTTGTGGTACTACGAGGCAAAGGTTTGCCAAAGAGTGGATTTCT
GGTGAACCATGGCGATCAATACGTGCGGTTCCGTATTGACTTCCCAACAGCATTGAATGAACGGCAGCGTGCTATAATGGAAGAATTTGCGCAGG
AGGAAGTTGTTAATGGAGATTACATGGATGGAGAAGTAAATTTGTAAGTTTTATTCTTTATTGTCTTTGAATGCATGACATGACTGATCCGTCAG
AAGTATTTGCTTACTCAGCTTTCTTTGAACTTTTTTGTTAACTAATTTAAGAAGACTATAACTGGAAAATTTGTGCTATCTTTGATGCATGTGAA
TGTTCCCATGACTATTTGAGAAGTTCACCACAAGTACATACTGTTAAAAGTCAATTGAAATAATTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E247646] SGN-U571323 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T60690 [Download] [View] Facility Assigned ID: TMGGL93TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0031 Quality Trim Threshold: 14.5