EST details — SGN-C27415
| Search information |
| Request: 27415 | Match: SGN-C27415 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C27415 | Clone name: cLEF-43-L23 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C183095 is on microarray TOM1: SGN-S1-1-4.1.3.9
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183095 [TUS-41-E13] | Trace: SGN-T191481 | EST: SGN-E390155 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183095 [TUS-41-E13] | Trace: SGN-T197473 | EST: SGN-E396147 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E245621 | Length: 605 bp (900 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E245621 [] (trimmed)
GGCAAGGAAATGTGGTGCCGAGGAATTGTGGTTCTCACTGATGCTCAGCTTTCCCCTCCTGATGGATTGACTTATGAAGAATTCACGTCCCGAAG
ATCAGAGGCACTTTTGAAAATCGTCCGGATGGGTGCTCGAATCAGGAAACAAGACATTCAGGCTGCTTCAATTCCTGTTGTCTTGGTTGAGAATA
GTGGCAGATGTAACAAGAATGAAAGTGACGAAAAGATTCTTCCAAGTGGAATTGCGTGGATACCCAATTTAGTCCAAACTATTACAGATGCTGTT
TTAAGTGGAAGCAAGGGTATTTTGGTTGATCAAAAACTGATTGAAGGTCCTAATCCAAACAATAGGGGCAAAGTGCTAATTCCTTTTATACTAGC
ATTCCAGTATTTCTTTGTAGTGAAAAGGATCCAGAGGTCCATTAAGAATGATATTGCACGGGAGACCAGGCCTTCATGGGCATAAACATTCATTG
GAATGGCTCTTGTTTGTCAACTTAATTCCCCTTTTGGTTCTTTGAAGGATTTTGGATTTCCTTGCCATCAGCTTATCAGTTTATACTTTTCTTGG
TTAAGTAATTATATTTATTAGTAGCCAGAGAAACC
ATCAGAGGCACTTTTGAAAATCGTCCGGATGGGTGCTCGAATCAGGAAACAAGACATTCAGGCTGCTTCAATTCCTGTTGTCTTGGTTGAGAATA
GTGGCAGATGTAACAAGAATGAAAGTGACGAAAAGATTCTTCCAAGTGGAATTGCGTGGATACCCAATTTAGTCCAAACTATTACAGATGCTGTT
TTAAGTGGAAGCAAGGGTATTTTGGTTGATCAAAAACTGATTGAAGGTCCTAATCCAAACAATAGGGGCAAAGTGCTAATTCCTTTTATACTAGC
ATTCCAGTATTTCTTTGTAGTGAAAAGGATCCAGAGGTCCATTAAGAATGATATTGCACGGGAGACCAGGCCTTCATGGGCATAAACATTCATTG
GAATGGCTCTTGTTTGTCAACTTAATTCCCCTTTTGGTTCTTTGAAGGATTTTGGATTTCCTTGCCATCAGCTTATCAGTTTATACTTTTCTTGG
TTAAGTAATTATATTTATTAGTAGCCAGAGAAACC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E245621] | SGN-U581266 | Tomato 200607 | Build 2 | 56 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T61040 [Download] [View] | Facility Assigned ID: TMGGO72TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0093 | Quality Trim Threshold: 12.5 |
Working
