EST details — SGN-C27816

Search information 
Request: 27816Match: SGN-C27816
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C27816Clone name: cLEF-45-J8
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C176759 is on microarray TOM1: SGN-S1-1-4.1.9.17
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176759 [TUS-24-M13] Trace: SGN-T192983 EST: SGN-E391657 Direction: 3' Facility: INRA
Clone: SGN-C176759 [TUS-24-M13] Trace: SGN-T192984 EST: SGN-E391658 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E246615Length: 471 bp (886 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E246615 [] (trimmed) GCAATTAGAAATTATGTTCCTGCTTCCACTTTTCCTCTTGGCCTTGACTTTTTTCATCTTCAATATTTTCAGATCATCAAAAACCACACAACTTC
CACCAGGATCAACACCATGGCCAGTCATAGGTAGTATTTTTCAAATGGTAAAAATGCCTCACATAACTCTGACAAATTTAGCAAAAACTTATGGC
CCTGTTATGTCCCTAAAGCTTGGAACTAAATGGTTAGTTGTTGGATCATCATCTCTTGCTGCTATAGAAATCCTCACAACCCATGATGGAATTCT
GTCAAGGAGAGATGTTCCAAATGCTGCTCCATCAAAAGGGTTAGATCTTGACAAGACATCACTGGGCTGGAGATCTGAATGTAACAGTGGATGGA
GATACTTGAGGACTTTATGCAGAGCCGAGCTTTTCGCTGGAAAAGTATTGGAGTCTCAAGCTTGTCTGAGGGAGAAAAAAGTGATGGAATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E246615] SGN-U569640 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T61350 [Download] [View] Facility Assigned ID: TMGGX52TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.957 Expected Error Rate: 0.0115 Quality Trim Threshold: 14.5