EST details — SGN-C28066

Search information 
Request: 28066Match: SGN-C28066
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C28066Clone name: cLEF-46-H17
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C176873 is on microarray TOM1: SGN-S1-1-2.2.8.1
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176873 [TUS-25-B7] Trace: SGN-T181951 EST: SGN-E368998 Direction: 3' Facility: INRA
Clone: SGN-C176873 [TUS-25-B7] Trace: SGN-T181952 EST: SGN-E368999 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E247232Length: 385 bp (904 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E247232 [] (trimmed) AGGAAATGGAGAAGTGGTTTGAAGAATTTCAGGTAATGGGAATAAAGCCAGATGTTATGACATTTAACATTTTAATCAAGTCATATGGAAGAGCT
GGCATGTACCAGAAAATGGAGTGTGTACTTGATTTCATGAAGAATTGGTTCTATTCTCCAACAGTTGTGACTTACAATATCATCATTGAGACATT
GGGGAAAGCTTGCCTCATTAAGAACATGGAACAGTTTTTCCTACAGATGAAGCATGAAGGGGTGAAGCCAAGTTCATTCACTTATTGCTCTCTTG
TCAGTGCGTATAGTAGAGCTGCACTTATGGAAAATGTTGATTCAATCATGAGGCAAGTTGAGAATTCAGATGTAGTTCTAGATACTCCTTTTTTC
AATTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E247232] SGN-U573314 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T61643 [Download] [View] Facility Assigned ID: TMGHA45TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0115 Quality Trim Threshold: 14.5