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EST details — SGN-C28127

Search information 
Request: 28127Match: SGN-C28127
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C28127Clone name: cLEF-46-K14
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C176898 is on microarray TOM1: SGN-S1-1-1.3.8.1
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176898 [TUS-25-C8] Trace: SGN-T181803 EST: SGN-E369311 Direction: 3' Facility: INRA
Clone: SGN-C176898 [TUS-25-C8] Trace: SGN-T181804 EST: SGN-E369312 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E247218Length: 653 bp (1014 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E247218 [] (trimmed) AAATTCTGATGAATTTCACCAAATTTACTCAGATTCATCATTAGCATTATCCAGATCATCTTCTTGCCTTTACTCACAGCCAAGTTTACCATCAA
TTCCTTCTTTAACTCCACTTTCAACTCATTCAGAACTTTTATCAAACACCTTCTGTGCATCCACTTTTACTGGCCTTTCCTCCTCCGTTTTCTGC
CTATCACTCGCCGGAAAACATCTCTACACCGGAACTTCCAACGGCGAAATCCTTCTACGGAACCAAGAGAAAAATCACTCCGTAGTAGTAGCTCA
AAAACAGAGTAAGAGCTCTGTTAAATCTATAGTTATTTTTGGGGATAAACTCTTCACTGCTCACCAAGATCATAAAATTCGTGTATGGAAAATCG
ACAACCACGATCATAATCAAAGTAATTACAAATGCATTGCTACTCTACCGACGCTGAATGATCGGTGTATGAGATTATTCAGCGCGAAAAACTAC
GTTGAAATTCGTAGACATAAGAAATGTACATGGGTTCATCATGTTGATACAGTTTCAGCTCTAGCTATATCATCTGATAATACTCTGCTTTACTC
TGCTTCATGGGATAGAACTTTCAAAATCTGGAGAATTTTGGATTTCAAATGCCTTGAATCAGTCTGGAATGCTCATGACGATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E247218] SGN-U583051 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T61629 [Download] [View] Facility Assigned ID: TMGGZ67TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0049 Quality Trim Threshold: 14.5