EST details — SGN-C28889

Search information 
Request: 28889Match: SGN-C28889
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C28889Clone name: cLEF-49-I19
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C177042 is on microarray TOM1: SGN-S1-1-1.1.8.3
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C177042 [TUS-25-I8] Trace: SGN-T181754 EST: SGN-E369262 Direction: 3' Facility: INRA
Clone: SGN-C177042 [TUS-25-I8] Trace: SGN-T181755 EST: SGN-E369263 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E249002Length: 552 bp (863 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E249002 [] (trimmed) AGACAACCCAATCTCCGCCTCCGGCCACACTGTTAATTTATCGTCCTAAGGTTTTCAGTCGCCGGAAAAGAAATTCGATTTTCCGACGAATCTAT
CGAGGTGATTGAGGATTTGGATGAGAATACAAGATGCCGCCAAAGCAATCTAAAGCCGATATTGCAAAGAAGCAGAAGGTAGTTGAAGACAAGAC
GTTCGGCTGATATACTACTAACTAGTCGCACAATGTTCAGAAATATGTTCAGTCTATACAGCAAAATGTTGCGCCTAAAGCTGATCCTAAGAAAC
TTGACGCCAAGAAAAAGAAGGAAGAAGAGAAAGCTAGAGAGAAAGAGCTTAGCGAATTGTTCAAAGTCGCTATTAGCCAACCTAAAGTGCCTCTA
GGTGTTGATCCAAAATCTATTTTATGTGAGTTCTTTAAGGCGGGGCAATGTGTTAAGGGTTTTAAGTGCAAGTTCTCTCACGATCTGAATGTTCA
GCGAAAAGGAGAGAAGATTGATATTTTCAACGATAAGCGTGATGAAGATGGAAAGGAAACAATGGACGATTGGGATC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E249002] SGN-U579706 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T62510 [Download] [View] Facility Assigned ID: TMGHK58TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0214 Quality Trim Threshold: 14.5