EST details — SGN-C28894
| Search information |
| Request: 28894 | Match: SGN-C28894 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C28894 | Clone name: cLEF-49-I23 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C177043 is on microarray TOM1: SGN-S1-1-8.1.8.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177043 [TUS-25-I9] | Trace: SGN-T181594 | EST: SGN-E369732 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177043 [TUS-25-I9] | Trace: SGN-T181595 | EST: SGN-E369733 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E248841 | Length: 548 bp (855 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E248841 [] (trimmed)
CTGACTTTTCTAACTTTATTCTTTGACATTTATAATACAGATCTCTATCTTCTTCATTCAATACATACACAATACAATACCAAATACAAGATTAA
TAATATTCTTTCTGCCTAACCTTAAATCTTTGTTTATCAGGTTGAATCTTTTATACAAGGAATACTTACTTACATCTATGGGAGAAGCACCAGCT
TTCTTTGCTGATAGTCTCTTGGGAGATTTTCCAAATGGGATCGATTTGAAATCTAAAGGCCACAAAACAGCTATTTCTATCGGCTCTAAAATTTA
TGTGATTGGCGGGGCTGATCATGAGTCGACAGCGGTAATTGGAGTTCAAATATTTGAGAAATCTAGTGGGGAATGGATAAACCCCACTGTGCTGG
GTACTAAACCCAAAGTCTCAAATGGCCACTCAGCTGTGCTTTTAAATGGTGATCGTATATTGGTTATTAAGGGCAATTCCAAGTCTGATGAATGC
TTTTGGTTTCTTGAGGTGGGCACCTCATTTATAAGAGAACAGGAAAAGACATATGGAACTGAAGTGGTTGCCT
TAATATTCTTTCTGCCTAACCTTAAATCTTTGTTTATCAGGTTGAATCTTTTATACAAGGAATACTTACTTACATCTATGGGAGAAGCACCAGCT
TTCTTTGCTGATAGTCTCTTGGGAGATTTTCCAAATGGGATCGATTTGAAATCTAAAGGCCACAAAACAGCTATTTCTATCGGCTCTAAAATTTA
TGTGATTGGCGGGGCTGATCATGAGTCGACAGCGGTAATTGGAGTTCAAATATTTGAGAAATCTAGTGGGGAATGGATAAACCCCACTGTGCTGG
GTACTAAACCCAAAGTCTCAAATGGCCACTCAGCTGTGCTTTTAAATGGTGATCGTATATTGGTTATTAAGGGCAATTCCAAGTCTGATGAATGC
TTTTGGTTTCTTGAGGTGGGCACCTCATTTATAAGAGAACAGGAAAAGACATATGGAACTGAAGTGGTTGCCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E248841] | SGN-U568368 | Tomato 200607 | Build 2 | 65 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T62349 [Download] [View] | Facility Assigned ID: TMGHK60TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.953 | Expected Error Rate: 0.0081 | Quality Trim Threshold: 14.5 |
Working
