EST details — SGN-C29038

Search information 
Request: 29038Match: SGN-C29038
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C29038Clone name: cLEF-49-P2
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C177123 is on microarray TOM1: SGN-S1-1-8.4.8.11
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C177123 [TUS-25-L17] Trace: SGN-T182002 EST: SGN-E369049 Direction: 3' Facility: INRA
Clone: SGN-C177123 [TUS-25-L17] Trace: SGN-T182003 EST: SGN-E369050 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E248976Length: 461 bp (1052 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E248976 [] (trimmed) CAGAGTGTTGGATAATTGGGTATTAAACATCAATCCATCCCATAATTTAAGGAGGATTCAATAAGAAATACAAAACATACACATAGTTATACATG
CTACGATACTATGGAATCGTCTACGTATTTTTTTAAGGTTATATACAAACATTATTATCTTTCAGTATTTTATCAAACTTACATAATGCAGCATT
TCACAACTAGGCCTTTTTGATCCACCCGGCCCTCTTCATTGCCATCAGAAGGCTGAGCTAGTTTTCGATTTTGGGGAGACGTCATTTCCTTTTTC
AACTGCATCAGTATATCCTCCATTGTGTTTTCCCTCTTCCAGTCAGCAAGCATGGGGAAATGACTTGGCTCTACCACACCAGTTTCATAATTTAC
GCAGCTCATGTTAATCCTGGACTGGAACCTTACACCAGGTGGCTGATCCGGATACTCCTTTCCACAAAATAGTTTCAGCTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E248976] SGN-U577496 Tomato 200607 Build 2 51 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T62484 [Download] [View] Facility Assigned ID: TMGHN85TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0151 Quality Trim Threshold: 12.5