EST details — SGN-C32420
| Search information |
| Request: 32420 | Match: SGN-C32420 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C32420 | Clone name: cLEG-1-G7 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183443 is on microarray TOM1: SGN-S1-1-8.4.2.19
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183443 [TUS-42-D1] | Trace: SGN-T200341 | EST: SGN-E399346 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183443 [TUS-42-D1] | Trace: SGN-T200469 | EST: SGN-E399589 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E248367 | Length: 610 bp (858 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E248367 [] (trimmed)
TTTTTTGTACATCTTTTAATTACCAAAAAAAAAAGAGGAAGAAGATATGGCTTCTAATACATTGATGAGTTGTGGAATTCCAGCTGTTTGCCCCT
CTTTCCTCTCTTCTACCAAGTCCAAATTCGCCGCCGCGATGCCGGTGTCCGTTGGAGCTACCAACTCCATGTCTCGGTTCTCCATGTCAGCTGAT
TGGATGCCCGGGCAGCCCCGTCCATCTTACCTCGACGGCTCAGCCCCCGGAGATTTTGGATTTGATCCACTTGGTTTAGGAGAAGTACCTGCAAA
TTTGGAAAGATACAAAGAATCTGAACTTATTCATTGCAGATGGGCTATGCTTGCTGTTCCCGGAATCATAGTACCAGAGGCATTGGGCTTAGGTA
ATTGGGTCAAGGCCCAAGAATGGGCAGCCATTCCTGGTGGACAAGCTACATATTTGGGCCAGCCTGTTCCATGGGGAACACTTCCTACTATTTTG
GCTATTGAATTTCTAGCCATAGCTTTTGTAGAACACCAAAGGAGTATGGAAAAAGATTCAGAAAAGAAGAAGTACCCTGGTGGGGCTTTTGACCC
ATTGGGCTACTCTAAAGACCCTGCTAAATTTGAAGAACTC
CTTTCCTCTCTTCTACCAAGTCCAAATTCGCCGCCGCGATGCCGGTGTCCGTTGGAGCTACCAACTCCATGTCTCGGTTCTCCATGTCAGCTGAT
TGGATGCCCGGGCAGCCCCGTCCATCTTACCTCGACGGCTCAGCCCCCGGAGATTTTGGATTTGATCCACTTGGTTTAGGAGAAGTACCTGCAAA
TTTGGAAAGATACAAAGAATCTGAACTTATTCATTGCAGATGGGCTATGCTTGCTGTTCCCGGAATCATAGTACCAGAGGCATTGGGCTTAGGTA
ATTGGGTCAAGGCCCAAGAATGGGCAGCCATTCCTGGTGGACAAGCTACATATTTGGGCCAGCCTGTTCCATGGGGAACACTTCCTACTATTTTG
GCTATTGAATTTCTAGCCATAGCTTTTGTAGAACACCAAAGGAGTATGGAAAAAGATTCAGAAAAGAAGAAGTACCCTGGTGGGGCTTTTGACCC
ATTGGGCTACTCTAAAGACCCTGCTAAATTTGAAGAACTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E248367] | SGN-U580126 | Tomato 200607 | Build 2 | 162 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T64430 [Download] [View] | Facility Assigned ID: TBFAA40TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0057 | Quality Trim Threshold: 14.5 |
Working
