EST details — SGN-C34160
| Search information |
| Request: 34160 | Match: SGN-C34160 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C34160 | Clone name: cLEG-29-P18 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C182388 is on microarray TOM1: SGN-S1-1-7.4.8.14
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C182388 [TUS-39-H2] | Trace: SGN-T191539 | EST: SGN-E390213 | Direction: 5' | Facility: INRA |
| Clone: SGN-C182388 [TUS-39-H2] | Trace: SGN-T197573 | EST: SGN-E396247 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E254602 | Length: 338 bp (942 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E254602 [] (trimmed)
CGATTGCATTCTCCATTCTTGGAAGTGGCCATTCTTGATTTCTTGAAACCAAAGTGTTTTTGTTATATACAGGGGGTGGAGTTAGAGGGTAAGTT
ACGCATTTAGTCGTAACTTTAGTCAAACTTCGTAATAATTTAAAATTCAGAGTGGCCATTGTTGAAAGAGAGGGTGGAATTTGTAAGTCAAGAAA
CAGGTTACTCCTGTTTGAGTGAGGAAAAGTTGGTTTGCCTGTCTGTGGTCTTTTTATAATCTTTTTCTACAGAAGAGAAAGTGGGTAATTTTGTT
TGAGAGTGGAAATATTCTCTAGTGGGAATCTACTAGGAGTAATTTATTTTCTA
ACGCATTTAGTCGTAACTTTAGTCAAACTTCGTAATAATTTAAAATTCAGAGTGGCCATTGTTGAAAGAGAGGGTGGAATTTGTAAGTCAAGAAA
CAGGTTACTCCTGTTTGAGTGAGGAAAAGTTGGTTTGCCTGTCTGTGGTCTTTTTATAATCTTTTTCTACAGAAGAGAAAGTGGGTAATTTTGTT
TGAGAGTGGAAATATTCTCTAGTGGGAATCTACTAGGAGTAATTTATTTTCTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E254602] | SGN-U580527 | Tomato 200607 | Build 2 | 240 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T68868 [Download] [View] | Facility Assigned ID: TBFEL93TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.917 | Expected Error Rate: 0.0313 | Quality Trim Threshold: 14.5 |
Working
