EST details — SGN-C34269
Search information |
Request: 34269 | Match: SGN-C34269 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C34269 | Clone name: cLEG-30-F18 |
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Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183086 is on microarray TOM1: SGN-S1-1-5.1.3.5
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C183086 [TUS-41-E4] | Trace: SGN-T196491 | EST: SGN-E395165 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E255411 | Length: 548 bp (877 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E255411 [] (trimmed)
GAAAATTTTATAAGTTACATGCAACATAATGGCAATTGATTATATGATCACGAGAAATAACAACATGATATCCAAAGAAGATCAAGTATCAAATA
AGTCGTTGAGTTTTAATGCATCATTGATGAAAAACGAGTCAAATATACCAAGCCAATTCATATGGCCGGACCATGAGAAGCCAAATTATGCTAGT
GTTACTAGAGAACTACAAGTTCCACTAATAGACTTAAGTGGGGTACTTTCAAATGACCCTATTGAAATCAAGAAAGCAACTAGACTTGTTAATGA
AGCATGTACAAAACATGGTTTTTTCTTAGTGGTTAACCATGGGGTTGACACAAATCTCATAAAAAATGCACATGTTTACATAGACAAGTTCTTTC
AATTGCCACTTTGTGAGAAGCAAAAAGCACAAAGAAAAGTTGGTGAACATTGTGGTTATGCTAGTAGCTTTGTTGGAAGGTTTTCATCTAAGTTG
CCTTGGAAAGAAACACTCTCGTTTCAATACTCTGATCAGAAAGGCTCATCACACATAGTTGAAGATTATTTTC
AGTCGTTGAGTTTTAATGCATCATTGATGAAAAACGAGTCAAATATACCAAGCCAATTCATATGGCCGGACCATGAGAAGCCAAATTATGCTAGT
GTTACTAGAGAACTACAAGTTCCACTAATAGACTTAAGTGGGGTACTTTCAAATGACCCTATTGAAATCAAGAAAGCAACTAGACTTGTTAATGA
AGCATGTACAAAACATGGTTTTTTCTTAGTGGTTAACCATGGGGTTGACACAAATCTCATAAAAAATGCACATGTTTACATAGACAAGTTCTTTC
AATTGCCACTTTGTGAGAAGCAAAAAGCACAAAGAAAAGTTGGTGAACATTGTGGTTATGCTAGTAGCTTTGTTGGAAGGTTTTCATCTAAGTTG
CCTTGGAAAGAAACACTCTCGTTTCAATACTCTGATCAGAAAGGCTCATCACACATAGTTGAAGATTATTTTC
Unigenes |
Current Unigene builds | |||||
[SGN-E255411] | SGN-U581955 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T69137 [Download] [View] | Facility Assigned ID: TBFEP33TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.942 | Expected Error Rate: 0.0050 | Quality Trim Threshold: 14.5 |