EST details — SGN-C34348
| Search information |
| Request: 34348 | Match: SGN-C34348 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C34348 | Clone name: cLEG-30-J4 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177228 is on microarray TOM1: SGN-S1-1-7.1.7.16
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177228 [TUS-26-A2] | Trace: SGN-T1442 | EST: SGN-E378270 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C177228 [TUS-26-A2] | Trace: SGN-T182391 | EST: SGN-E368258 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E255549 | Length: 603 bp (871 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E255549 [] (trimmed)
GTGAACTCTTGTTTTTGTGGAATCCTGCCACCAGAGAGTTGCGACCTCTGCCTCCTGCGCCTTTTGTGACTGAGCACTCCTTATGGAACTATGAT
CATGAATTTGGATTGGGGTTTGACCAACTGACTCAGCATTATAAGGTTGTTTGGATTCGAGTATTCTTTGAGAACCGGGAACAAGGACAGGGACA
GAGACGGCGCTTTTACCTTCATAATTTTGTCTGTGTCTATTCCTCATGCGATAACTCATGGAAGAGCCTACAATTCCCTTCCAGTTTTACCTTAG
GTTTTCCCTATTCCGTCACATATCTCAACGGGATTTATTATTGGATTTGTAGGAGCGACAATAATGATATATGCAAGATTCAGTCATTTGCCATG
GGCAGCCAACAGTTGGGGGAGATGCAAGGCCCAGATATTCCAGGTGAACACTGGGTGAGGCTGACACTGCGTGGAGACTCTCTTGCAATGTTAGT
CAGTGATAAGTGTATGACATCCATATACGAAATGAAACAAGAGGGAAGTTGGTCCAAGGTGTTAACTGTTCAACCCCGTATAGATGCTGCTCATT
TGCCTAAAGGTATTTGGGAGAATGATAAGATTG
CATGAATTTGGATTGGGGTTTGACCAACTGACTCAGCATTATAAGGTTGTTTGGATTCGAGTATTCTTTGAGAACCGGGAACAAGGACAGGGACA
GAGACGGCGCTTTTACCTTCATAATTTTGTCTGTGTCTATTCCTCATGCGATAACTCATGGAAGAGCCTACAATTCCCTTCCAGTTTTACCTTAG
GTTTTCCCTATTCCGTCACATATCTCAACGGGATTTATTATTGGATTTGTAGGAGCGACAATAATGATATATGCAAGATTCAGTCATTTGCCATG
GGCAGCCAACAGTTGGGGGAGATGCAAGGCCCAGATATTCCAGGTGAACACTGGGTGAGGCTGACACTGCGTGGAGACTCTCTTGCAATGTTAGT
CAGTGATAAGTGTATGACATCCATATACGAAATGAAACAAGAGGGAAGTTGGTCCAAGGTGTTAACTGTTCAACCCCGTATAGATGCTGCTCATT
TGCCTAAAGGTATTTGGGAGAATGATAAGATTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E255549] | SGN-U583360 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T69275 [Download] [View] | Facility Assigned ID: TBFEP50TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.979 | Expected Error Rate: 0.0078 | Quality Trim Threshold: 14.5 |
Working
