EST details — SGN-C34371
| Search information |
| Request: 34371 | Match: SGN-C34371 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C34371 | Clone name: cLEG-30-K9 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183474 is on microarray TOM1: SGN-S1-1-1.1.2.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183474 [TUS-42-E8] | Trace: SGN-T1764 | EST: SGN-E378803 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C183474 [TUS-42-E8] | Trace: SGN-T196016 | EST: SGN-E394690 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183474 [TUS-42-E8] | Trace: SGN-T200287 | EST: SGN-E399244 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183474 [TUS-42-E8] | Trace: SGN-T200454 | EST: SGN-E399572 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E255308 | Length: 533 bp (865 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E255308 [] (trimmed)
GAAAAGGAAGTCGATGCTCACCCTATCAGTGCAATGAAGTTTTCTGTCTCACCAGTTGTGCGTGTAGCTGTTCAGTGCAAGGTCGCATCTGACCT
TCCCAAGCTTGTTGAAGGGTTGAAACGTCTGGCTAAGTCTGATCCTATGGTTGTTTGTTCTATTGAAGAGTCTGGAGAGCATATTATTGCTGGTG
CTGGAGAACTCCACCTTGAGATCTGTCTGAAGGATTTGCAGGATGACTTTATGGGCGGTGCTGAAATTATAAAATCTGATCCCGTTGTGTCCTTC
CGTGAGACGGTCCTCGAGAAGTCTACTCGAACTGTGATGAGCAAGTCCCCTAACAAGCATAACCGTTTGTACATGGAGGCTAGACCAATGGAGGA
AGGGCTTGCTGAGGCTATTGACGAGGGACGCATTGGCCCTAGGGATGACCCTAAGGTTCGTTCCAAGATCTTGGCTGAGGAGTTTGGCTGGGACA
AAGATCTTGCAAAGAAGATTTGGTGCTTTGGTCCTGAGACAACTGGTCCCAACATGGT
TCCCAAGCTTGTTGAAGGGTTGAAACGTCTGGCTAAGTCTGATCCTATGGTTGTTTGTTCTATTGAAGAGTCTGGAGAGCATATTATTGCTGGTG
CTGGAGAACTCCACCTTGAGATCTGTCTGAAGGATTTGCAGGATGACTTTATGGGCGGTGCTGAAATTATAAAATCTGATCCCGTTGTGTCCTTC
CGTGAGACGGTCCTCGAGAAGTCTACTCGAACTGTGATGAGCAAGTCCCCTAACAAGCATAACCGTTTGTACATGGAGGCTAGACCAATGGAGGA
AGGGCTTGCTGAGGCTATTGACGAGGGACGCATTGGCCCTAGGGATGACCCTAAGGTTCGTTCCAAGATCTTGGCTGAGGAGTTTGGCTGGGACA
AAGATCTTGCAAAGAAGATTTGGTGCTTTGGTCCTGAGACAACTGGTCCCAACATGGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E255308] | SGN-U583190 | Tomato 200607 | Build 2 | 176 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T69034 [Download] [View] | Facility Assigned ID: TBFEM65THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.966 | Expected Error Rate: 0.0113 | Quality Trim Threshold: 14.5 |
Working
