EST details — SGN-C34892
| Search information |
| Request: 34892 | Match: SGN-C34892 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C34892 | Clone name: cLEG-32-M11 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180781 is on microarray TOM1: SGN-S1-1-6.1.17.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180781 [TUS-35-E3] | Trace: SGN-T187385 | EST: SGN-E375617 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180781 [TUS-35-E3] | Trace: SGN-T187386 | EST: SGN-E375618 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E253614 | Length: 616 bp (827 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E253614 [] (trimmed)
TTTTATTACGTAATGCAACTGCCATAAGTACACATTTACAGCCACTACCTACTGTGAAGTTTGAAATGCAGGTACAGTTATCTTTTTTCCCATCA
TCTTTTCTTTCAACATAGTGGTTGTTTGCTAACTGTGGCATGATTTTGGACAACAATTCTAGCTTCTGGTACTCAAATTCATCGGTTGTTTGACT
TGCGCTAAAAAAAAAATCCAGTTAAATACAGAATACCGTTGATTCTACTAGTAGGAGCCCATTCAAATCTTGCTAATATGGATTTGGTTAAATAA
TGTTGCAGCTGTACAAAACTGAGGATGAGAAATATCTGCTTGATCTCCAAAGAATTAGTGGTCCGCAGTTCCTCTTCCTGGATTTCTGTGCTGGT
TTCATTAGGCAGCTAGAGGGGCCACAATGATTGGAAAGAAAGAAGGATATATGGAGTAATTGTGTATTTTGTTGACAAATGTGAAACTTTGTTGT
ACATATCAATGTTAATAGGTTTATAATGTTCCTTACCTATACTTTAAATTTGTGTTCATGTTTCTATAGTTCAGGCTTTTGCCAGATGTGATATT
CTCTCTCAGTATAAGAGACCGCAGCTCTCTTATTCCTACTAATTTT
TCTTTTCTTTCAACATAGTGGTTGTTTGCTAACTGTGGCATGATTTTGGACAACAATTCTAGCTTCTGGTACTCAAATTCATCGGTTGTTTGACT
TGCGCTAAAAAAAAAATCCAGTTAAATACAGAATACCGTTGATTCTACTAGTAGGAGCCCATTCAAATCTTGCTAATATGGATTTGGTTAAATAA
TGTTGCAGCTGTACAAAACTGAGGATGAGAAATATCTGCTTGATCTCCAAAGAATTAGTGGTCCGCAGTTCCTCTTCCTGGATTTCTGTGCTGGT
TTCATTAGGCAGCTAGAGGGGCCACAATGATTGGAAAGAAAGAAGGATATATGGAGTAATTGTGTATTTTGTTGACAAATGTGAAACTTTGTTGT
ACATATCAATGTTAATAGGTTTATAATGTTCCTTACCTATACTTTAAATTTGTGTTCATGTTTCTATAGTTCAGGCTTTTGCCAGATGTGATATT
CTCTCTCAGTATAAGAGACCGCAGCTCTCTTATTCCTACTAATTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E253614] | SGN-U566968 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T69590 [Download] [View] | Facility Assigned ID: TBFEU78TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.951 | Expected Error Rate: 0.0090 | Quality Trim Threshold: 14.5 |
Working
