EST details — SGN-C35604
Search information |
Request: 35604 | Match: SGN-C35604 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C35604 | Clone name: cLEG-35-J17 |
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Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180887 is on microarray TOM1: SGN-S1-1-4.1.17.16
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C180887 [TUS-35-I13] | Trace: SGN-T187494 | EST: SGN-E375726 | Direction: 3' | Facility: INRA |
Clone: SGN-C180887 [TUS-35-I13] | Trace: SGN-T187495 | EST: SGN-E375727 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E255880 | Length: 477 bp (854 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E255880 [] (trimmed)
TTTTAAGCTACGATTTGCTAAACTTGGCAGCTACTTGAGTCTTTTAGAATCAAAATGCAAGAAAAGGTCTTAGTACACAGCAGAATACAATGGCT
TCAGTTACATCGATTAACTAATCCCCTCACTTCAAAAAGAAGCGCTCCTCCTACACGGATAATGGTGCATGACTGAACGTACTGTCTTTTGAATG
TCCAACTCAATTACACATGATAACCCCCAGGGTATCTACTCCTGCTCCATATCTGTAGGACCATCAGGTGTCTGTTCAGGTACATTTTCCTCCAC
CTTGTTAGCTTTATCATCGCTATCTGTAACCATCTTGTCTTCTTTGGCGTCTTCTTTTTTAGCAGTAACATCATGATCACCAATATTTAGATCTG
CAGGAAGCTGGCCCGACTTCAATGCCTGTTCAAGTCTAGCCACCTCCTCAAGAGTTTGGGAATTCACAATGGCAGCCTTAATTGCTATTATTTGC
TC
TCAGTTACATCGATTAACTAATCCCCTCACTTCAAAAAGAAGCGCTCCTCCTACACGGATAATGGTGCATGACTGAACGTACTGTCTTTTGAATG
TCCAACTCAATTACACATGATAACCCCCAGGGTATCTACTCCTGCTCCATATCTGTAGGACCATCAGGTGTCTGTTCAGGTACATTTTCCTCCAC
CTTGTTAGCTTTATCATCGCTATCTGTAACCATCTTGTCTTCTTTGGCGTCTTCTTTTTTAGCAGTAACATCATGATCACCAATATTTAGATCTG
CAGGAAGCTGGCCCGACTTCAATGCCTGTTCAAGTCTAGCCACCTCCTCAAGAGTTTGGGAATTCACAATGGCAGCCTTAATTGCTATTATTTGC
TC
Unigenes |
Current Unigene builds | |||||
[SGN-E255880] | SGN-U574887 | Tomato 200607 | Build 2 | 37 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T70364 [Download] [View] | Facility Assigned ID: TBFFI57TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.970 | Expected Error Rate: 0.0005 | Quality Trim Threshold: 14.5 |