EST details — SGN-C37227
Search information |
Request: 37227 | Match: SGN-C37227 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C37227 | Clone name: cLEG-41-G9 |
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Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177339 is on microarray TOM1: SGN-S1-1-8.1.6.4
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C177339 [TUS-26-E17] | Trace: SGN-T182270 | EST: SGN-E368860 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E259021 | Length: 403 bp (907 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E259021 [] (trimmed)
GGGTCTTGAATTGCTCAAGACTGCCATCGAAAAAGCAGGTTATACTGGAAAAGTTGTCATCGGAATGGATGTTGCAGCATCTGAATTCTATGGAA
AGGACAAAACTTATGATTTGAACTTCAAAGAAGAGAACAACAATGGTTCCCAAAAGATCTCAGGTGACCAGCTCAAAGATTTGTACAAGTCATTT
GTGTCTGAGTACCCTATTGTTTCGATAGAAGATCCATTTGACCAAGATGACTGGGAGACCTATGCTAAGCTCACTGCTGAAATTGGGCAGAAAGT
ACAAATTGTAGGAGATGACCTTCTCGTCACCAATCCTAAGAGAGTGGCCAAGGCAATCAGTGAAAAGACTTGCAATGCCCTTCTTCTTAAGGTTA
ACCAAATTGGCAGCGTGACTGAG
AGGACAAAACTTATGATTTGAACTTCAAAGAAGAGAACAACAATGGTTCCCAAAAGATCTCAGGTGACCAGCTCAAAGATTTGTACAAGTCATTT
GTGTCTGAGTACCCTATTGTTTCGATAGAAGATCCATTTGACCAAGATGACTGGGAGACCTATGCTAAGCTCACTGCTGAAATTGGGCAGAAAGT
ACAAATTGTAGGAGATGACCTTCTCGTCACCAATCCTAAGAGAGTGGCCAAGGCAATCAGTGAAAAGACTTGCAATGCCCTTCTTCTTAAGGTTA
ACCAAATTGGCAGCGTGACTGAG
Unigenes |
Current Unigene builds | |||||
[SGN-E259021] | SGN-U578193 | Tomato 200607 | Build 2 | 32 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T72053 [Download] [View] | Facility Assigned ID: TBFGE41TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.955 | Expected Error Rate: 0.0119 | Quality Trim Threshold: 14.5 |