EST details — SGN-C37445
| Search information |
| Request: 37445 | Match: SGN-C37445 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C37445 | Clone name: cLEG-42-B16 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180696 is on microarray TOM1: SGN-S1-1-3.1.17.14
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180696 [TUS-35-A14] | Trace: SGN-T193597 | EST: SGN-E392271 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E259739 | Length: 602 bp (929 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E259739 [] (trimmed)
TTTCTCTGTGTGCGCATTTATCTGTATACATTATTCGGCATTTGCAGGTCGGAGAATCTGATCGGAGCAAGTTGTGATCGACGATCGGAGTTGAA
AGGCTTGTAGTTGTTAAATTCATCCATAAGGCTAAATGGGAGACATAGTGATTGAACATTCAGGGTCGCCACATTATGAGGCCTTGAACTTGCAA
AATGTTACAACATCTGAGAATGATGCTGATCTGGTTCGGAGTTACTGTGGGGGCTTCTTTCCTGAGGGTAGTACACATGAAGAAAAATCCACTTG
CACCGAAGCCCTCGACAGAGGATTCTTTGAATATGGATGTTCCCACTATCGCCGTAGATGTCGCATTAGAGCCCCATGCTGCGATGAGATGTTTG
ACTGCAGGCATTGTCATAATGAATCTAAGAACAATATCAACATTGACCAGAAACTTCGACATGAGATTCCTCGTCACAAGGTGGAAAGGATTATA
TGCTCACTTTGTAATACAGAGCAAGAGGTTCGGCAAGTTTGCATCAATTGCGGTGTGTGCATGGGGAGATATTTCTGTGAAACGTGTAAGCTATT
TGATGATGATATATCCAAAAGACAGTATCACT
AGGCTTGTAGTTGTTAAATTCATCCATAAGGCTAAATGGGAGACATAGTGATTGAACATTCAGGGTCGCCACATTATGAGGCCTTGAACTTGCAA
AATGTTACAACATCTGAGAATGATGCTGATCTGGTTCGGAGTTACTGTGGGGGCTTCTTTCCTGAGGGTAGTACACATGAAGAAAAATCCACTTG
CACCGAAGCCCTCGACAGAGGATTCTTTGAATATGGATGTTCCCACTATCGCCGTAGATGTCGCATTAGAGCCCCATGCTGCGATGAGATGTTTG
ACTGCAGGCATTGTCATAATGAATCTAAGAACAATATCAACATTGACCAGAAACTTCGACATGAGATTCCTCGTCACAAGGTGGAAAGGATTATA
TGCTCACTTTGTAATACAGAGCAAGAGGTTCGGCAAGTTTGCATCAATTGCGGTGTGTGCATGGGGAGATATTTCTGTGAAACGTGTAAGCTATT
TGATGATGATATATCCAAAAGACAGTATCACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E259739] | SGN-U578661 | Tomato 200607 | Build 2 | 77 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T72500 [Download] [View] | Facility Assigned ID: TBFGL08TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0060 | Quality Trim Threshold: 14.5 |
Working
