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EST details — SGN-C5215

Search information 
Request: 5215Match: SGN-C5215
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C5215Clone name: cLEC-30-P12
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C182083 is on microarray TOM1: SGN-S1-1-8.3.10.13
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C182083 [TUS-38-K9] Trace: SGN-T194671 EST: SGN-E393345 Direction: 3' Facility: INRA
Clone: SGN-C182083 [TUS-38-K9] Trace: SGN-T199340 EST: SGN-E398014 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E207335Length: 489 bp (771 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E207335 [] (trimmed) CTGAGCTGTGTGCTTTCACCGACGGTCTTCTTTTTCTCCTTCGATTGCTTCAGCTAGCAATTATGGTTCCACCTATCGAAACTCAAGTCAAGTCT
TCAGTGTCTCATAAGTTCTCCATTCCACCACTTAATGAAAGAATACTCTCTTCTATGACACGGAGATCAGTTGCAGCTCATCCTTGGCATGATCT
CGAGATAGGACCTAATGCTCCACAGATTTTCAATGTGGTGATTGAGATCAGTAAGGGGAGCAAGGTGAAGTATGAACTAGACAAAAAAACTGGAC
TGATCAAGGTAGATCGTGTACTTTACTCATCAGTTGTATACCCCCATAACTATGGGTTCATCCCTCGCACACTCTGTGATGACAGTGACCCTCTG
GATGTCTTATACATCATGCAGGAACCTATTCTCCCGGGTTGCTCTCTCAGGGCTAAAGCAATTGGCCTTATGCCCATGATTGATCAGGGAGATAT
GGACCACAAGATAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E207335] SGN-U568784 Tomato 200607 Build 2 16 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T29331 [Download] [View] Facility Assigned ID: TCAEP90TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0260 Quality Trim Threshold: 14.5