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EST details — SGN-C5648

Search information 
Request: 5648Match: SGN-C5648
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C5648Clone name: cLEC-32-I6
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C173831 is on microarray TOM1: SGN-S1-1-4.3.17.2
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C173831 [TUS-17-C13] Trace: SGN-T191416 EST: SGN-E390090 Direction: 5' Facility: INRA
Clone: SGN-C173831 [TUS-17-C13] Trace: SGN-T191631 EST: SGN-E390305 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E207761Length: 515 bp (828 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E207761 [] (trimmed) TTTTTTTTCTACTAGAAACGTCTGAAATTGCCAACTGTCTCTGCTCCTCACGCCACACACGGAGAGGCAAACACGCGGAGTTCTCTGTACTCAGT
CTCTTCGAGTCAGATCGAGTCAGCTGAAGATGCCTTCTCGCCGGCGAACGCTTTTGAAAGTCATCATCCTCGGCGATAGCGGGGTTGGAAAGACT
TCGTTGATGAATCAGTATCCTTTTAAGCTTTGTAACCTAGTATTGCTCGATTAATCACCAGTCCAAGAGTATTGTGAAAAAACAGTTTGATTCAC
TTTCCAGATGCAATTATACCTTATAATTGAATTGCCTTATTGTCTGCCTTCAATGATTCTTTATAGATATGTAAATAAGAAGTTCAGCAATCAGT
ACAAAGCAACTATTGGAGCTGATTTCTTGACAAAGGAAGTGCAGTTTGAGGATCGGCTCTTTACTCTACAGATTTGGGACACTGCTGGCCAAGAG
AGATTTCAGAGTCTTGGTGTTGCTTTTTACCGCGGTGCTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E207761] SGN-U579092 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T29974 [Download] [View] Facility Assigned ID: TCAEV51THB
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0026 Quality Trim Threshold: 14.5