EST details — SGN-C5724

Search information 
Request: 5724Match: SGN-C5724
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C5724Clone name: cLEC-32-M6
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C173860 is on microarray TOM1: SGN-S1-1-7.4.17.6
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C173860 [TUS-17-D18] Trace: SGN-T197069 EST: SGN-E395743 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E207775Length: 604 bp (831 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E207775 [] (trimmed) CAGGAAAGCCTTGTTACAAGAGGAAGCTGACAAGATGCCTATTGAAGAAGAAATTGATCAACAGCGTGCAAAATTGACTGCTTCAACTCCCTTGA
CCACTGAATTATTTATGGAATGGAAAAAAAAGAAGACGGAAGAAAGAGAGGCCAATTTGGCCAAACAGAGGGCAGATAGAGCTAAGAATGATCGC
ATGAGTGGTCGTGAGTTGTTCATGTCGGATGCTAGTTGGTTTGTGGATGATGTGGGGGCCTATGACAAGTATGATAGGGAAGAAGAGTCTGCTGA
ACTCCCAAAGGAGAATAAGGATTCTGCTAGGGAAGAGGCAAGCTCCTCGACATCAGCCCAGAAGAATATTCATGATGGTGGTGAGGCTTCACATA
AAGACCAAGTGGATGACATTTATGACGACGACGATGATGATGATGACTTTGATGTGGATGAGTTAAATGAACTGGAAGCTAGCCTTTCAAAAACA
TCGTTACAAATCAATGAACCTGGTAGTCGCGCTTGATCCTTGGGCCCAAAATCTATGCACATGGTATACACTTATCAGTGCATGCACTTTCATGT
CTACGTGATGCAAAATCATGTTGGCGTGCAGCAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E207775] SGN-U579706 Tomato 200607 Build 2 21 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T29988 [Download] [View] Facility Assigned ID: TCAEV75THB
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0053 Quality Trim Threshold: 14.5