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EST details — SGN-C62213

Search information 
Request: 62213Match: SGN-C62213
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C62213Clone name: cLEM-1-N16
cartOrder Clone
Library Name: cLEMOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit
Development Stage: immature green fruit

Microarray: Alias clone SGN-C177802 is on microarray TOM1: SGN-S1-1-1.4.6.16
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C177802 [TUS-27-H24] Trace: SGN-T193025 EST: SGN-E391699 Direction: 5' Facility: INRA
Clone: SGN-C177802 [TUS-27-H24] Trace: SGN-T193273 EST: SGN-E391947 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E270400Length: 519 bp (886 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E270400 [] (trimmed) GCTCTCTTCTTCTTCATTTTCTCTCTCTATACATACATATATTATATATATATATATATAAACGTATTGAGAGACCACCAGTAATGGGGGCGTAC
AGATCGGACGACGACTACGATTATTTGTTCAAGGTGGTGTTGATCGGCGATTCCGGCGTCGGGAAATCTAATCTTCTATCCAGATTTACACGTAG
CGAGTTCAGTTTGGAGTCAAAGTCAACGATCGGCGTTGAATTCGCTACTCGTAGCATTCGTGTTGATGATAAGGTTGTCAAGGCTCAGATTTGGG
ATACTGCCGGTCAGGAACGATATCGCGCAATCACGAGTGCCTACTATCGAGGAGCTGTTGGAGCATTGCTTGTCTATGATGTCACCCGTCATGTA
ACTTTTGAGAATGTAGAGAGATGGTTAAAAGAGCTCCGAGATCACACTGACTCTAGCATTGTCATAATGCTGGTGGGTAACAAGGCAGATTTGCG
TCATCTGCGTGCTGTTTCTACTGAGGATGCCCANGCATTTGCAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E270400] SGN-U577600 Tomato 200607 Build 2 25 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T83773 [Download] [View] Facility Assigned ID: TGFAD80TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.985 Expected Error Rate: 0.0077 Quality Trim Threshold: 14.5