EST details — SGN-C6324

Search information 
Request: 6324Match: SGN-C6324
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C6324Clone name: cLEC-35-B2
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C173887 is on microarray TOM1: SGN-S1-1-4.1.17.7
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C173887 [TUS-17-E21] Trace: SGN-T191427 EST: SGN-E390101 Direction: 5' Facility: INRA
Clone: SGN-C173887 [TUS-17-E21] Trace: SGN-T197464 EST: SGN-E396138 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E210366Length: 338 bp (967 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E210366 [] (trimmed) TTTTAAAGACAAAAATATACAACTGCATGAATACATGAATCAACAGTCGGTTTGTACAGTTCAACCAGCATTTTATATCCAAAGTTATTTTAGAA
GAAATAAAAGATTTACTCATGATCAATTTTTCTGGTGGACTGCAACTTGGTGTATGTCCATATCCTTCAACATAACTGAACGCCCACATGAATCA
CAAGGGGCGGTTCTTGATCCACAAACACTCTCGTGCTGTGTCAGTCCTCTTAAGCGATCCCTCACATCTGCTGCTGAAGTCCCTGCTTGGACCAT
GTCTCCACAAAACCGGCATGTTACAAGTCTCAAGGGACACTCCACAGATTGAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E210366] SGN-U564506 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T30714 [Download] [View] Facility Assigned ID: TCAFJ01TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0169 Quality Trim Threshold: 14.5