EST details — SGN-C63944
| Search information |
| Request: 63944 | Match: SGN-C63944 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C63944 | Clone name: cLEM-4-F17 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C180836 is on microarray TOM1: SGN-S1-1-7.3.17.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180836 [TUS-35-G10] | Trace: SGN-T193625 | EST: SGN-E392299 | Direction: 5' | Facility: INRA |
| Clone: SGN-C180836 [TUS-35-G10] | Trace: SGN-T199230 | EST: SGN-E397904 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E268799 | Length: 531 bp (846 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E268799 [] (trimmed)
GCAGAATTAAAGCTAGGGTTGCCTGGTGGAGCAAGAAAAAATGTTTATGGTGATAATGATACTTGTAATGTTAATGGTAAAAGAGGCTTTGTAGA
TTTGAAGCTTAATCTTTCTTCTGATATTAACAACATCAAGAATTCAACACACAAAACCCCAGCTGCCAAGGCACAAGTTGTGGGTTGGCCGCCCG
TAAAGTCCTTTCGAAAGAATATTTTGACTTCTCAAAAGCTTGATCGAGAGAATGATAATATTTTGGTGAAGGTGAGCATGGATGGTGCACCTTAC
CTTAGGAAAGTGGACTTAAACATGTACAAGAGTTATCAAGAATTATTTGATGCCTTAACCAAGATGTTCAATTCCTTCACTATTGTCCAAGGAAT
GAAAGATTTCATGCATGAGGGGAAACTGATGGACCTTTTGAATAGTTCTGATTATGTTCCTACCTATGAAGACAAAGATGGTGATTGGATGCTTG
TTGGAGATGTCCCATGGGGGATGTTTGTTGATTCTTGCAAACGCTTGCGCATCATG
TTTGAAGCTTAATCTTTCTTCTGATATTAACAACATCAAGAATTCAACACACAAAACCCCAGCTGCCAAGGCACAAGTTGTGGGTTGGCCGCCCG
TAAAGTCCTTTCGAAAGAATATTTTGACTTCTCAAAAGCTTGATCGAGAGAATGATAATATTTTGGTGAAGGTGAGCATGGATGGTGCACCTTAC
CTTAGGAAAGTGGACTTAAACATGTACAAGAGTTATCAAGAATTATTTGATGCCTTAACCAAGATGTTCAATTCCTTCACTATTGTCCAAGGAAT
GAAAGATTTCATGCATGAGGGGAAACTGATGGACCTTTTGAATAGTTCTGATTATGTTCCTACCTATGAAGACAAAGATGGTGATTGGATGCTTG
TTGGAGATGTCCCATGGGGGATGTTTGTTGATTCTTGCAAACGCTTGCGCATCATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E268799] | SGN-U581524 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T84217 [Download] [View] | Facility Assigned ID: TGFAO33TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.959 | Expected Error Rate: 0.0064 | Quality Trim Threshold: 14.5 |
Working
