EST details — SGN-C64535
| Search information |
| Request: 64535 | Match: SGN-C64535 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C64535 | Clone name: cLEM-6-G3 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178094 is on microarray TOM1: SGN-S1-1-5.1.4.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178094 [TUS-28-E4] | Trace: SGN-T183414 | EST: SGN-E370224 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178094 [TUS-28-E4] | Trace: SGN-T183415 | EST: SGN-E370225 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E270629 | Length: 601 bp (981 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270629 [] (trimmed)
GAAAAAGTTTTCATATTTAGTGATCACTAAAAAAAAATCAAGAAGATGTCGACTACTGTAGGCCAAGTCATTCGTTGCAAAGCTGCTGTGGCATG
GGAAGCTGGTAAGCCATTAGTGATGGAGGAAGTAGATGTTGCTCCTCCACAGAAAATGGAAGTTCGTCTTAAGATCCTCTATACTTCACTCTGTC
ATACTGATGTATACTTCTGGGAAGCTAAGGGTCAAAATCCAGTCTTTCCTCGAATTCTTGGACATGAAGCAGCAGGGATTGTGGAGAGTGTTGGA
GAGGGAGTAACAGACCTTGCACCAGGAGACCATGTTCTTCCTGTCTTTACAGGGGAATGTAAAGATTGTGCTCACTGTAAATCTGAAGAAAGCAA
TATGTGTAGCCTCTTAAGGATTAACACTGACAGGGGAGTGATGCTTAATGATGGAAAATCAAGATTTTCCATCAATGGAAACCCCATTTACCATT
TTGTTGGGACCTCTACTTTTAGTGAGTACACCGTGGTTCATGTTGGATGTGTTGCAAAAATTAACCCTCTTGCTCCTCTTGACAAAGTATGTGTC
CTTAGTTGTGGAATTTCGACAGGCCTTGGAG
GGAAGCTGGTAAGCCATTAGTGATGGAGGAAGTAGATGTTGCTCCTCCACAGAAAATGGAAGTTCGTCTTAAGATCCTCTATACTTCACTCTGTC
ATACTGATGTATACTTCTGGGAAGCTAAGGGTCAAAATCCAGTCTTTCCTCGAATTCTTGGACATGAAGCAGCAGGGATTGTGGAGAGTGTTGGA
GAGGGAGTAACAGACCTTGCACCAGGAGACCATGTTCTTCCTGTCTTTACAGGGGAATGTAAAGATTGTGCTCACTGTAAATCTGAAGAAAGCAA
TATGTGTAGCCTCTTAAGGATTAACACTGACAGGGGAGTGATGCTTAATGATGGAAAATCAAGATTTTCCATCAATGGAAACCCCATTTACCATT
TTGTTGGGACCTCTACTTTTAGTGAGTACACCGTGGTTCATGTTGGATGTGTTGCAAAAATTAACCCTCTTGCTCCTCTTGACAAAGTATGTGTC
CTTAGTTGTGGAATTTCGACAGGCCTTGGAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E270629] | SGN-U579420 | Tomato 200607 | Build 2 | 345 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T84385 [Download] [View] | Facility Assigned ID: TGFAU38TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0020 | Quality Trim Threshold: 14.5 |
Working
