EST details — SGN-C64625
Search information |
Request: 64625 | Match: SGN-C64625 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C64625 | Clone name: cLEM-6-L12 |
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Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178147 is on microarray TOM1: SGN-S1-1-8.3.4.6
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C178147 [TUS-28-G9] | Trace: SGN-T183226 | EST: SGN-E370299 | Direction: 3' | Facility: INRA |
Clone: SGN-C178147 [TUS-28-G9] | Trace: SGN-T183227 | EST: SGN-E370300 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E270936 | Length: 530 bp (904 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270936 [] (trimmed)
ACGAGGGAACCCACCACCCCAAACCCCCAACCACACCTTCTTAAGCAGAGTGTTGTAACAAAGAGTTGAGTGAAAAAATCATTAGGTGCAAAATG
GCTCTACAAGCAGCATCTTTGCTTCCATCTGCATTTTCTCTACACAAAGAGGGTAAAACATCAAGTGCTAATCTCAAGGACAGTAGCTTCTTTGG
AGTTGCATTGTCTTGCAATCTGAAATCTAAATTTACTCCTGCTGCAGGAAACAAGGAATTGACAAGGAAATTAGCGATTGTACCTATTAGAGCAC
AAACAGCTGCTACCACTCCTGCAATCACCCAGTCTACCTCAGGACAGAAGAAAACACTCAGGAAAGGCAATGTGATAATCACCGGAGCCTCCTCT
GGTTTAGGACTAGCTACAGCAAAGGCTATAGGCGAGTCAGGAGACTGGCACGTTATAATGGCCTGTAGGGACTTCCTCAAGGCTGAAAAAGCAGC
AAAATCACTTGGCATTCCGAAGGAAAATTACACTGTCATGCATCTGGATCTCGCT
GCTCTACAAGCAGCATCTTTGCTTCCATCTGCATTTTCTCTACACAAAGAGGGTAAAACATCAAGTGCTAATCTCAAGGACAGTAGCTTCTTTGG
AGTTGCATTGTCTTGCAATCTGAAATCTAAATTTACTCCTGCTGCAGGAAACAAGGAATTGACAAGGAAATTAGCGATTGTACCTATTAGAGCAC
AAACAGCTGCTACCACTCCTGCAATCACCCAGTCTACCTCAGGACAGAAGAAAACACTCAGGAAAGGCAATGTGATAATCACCGGAGCCTCCTCT
GGTTTAGGACTAGCTACAGCAAAGGCTATAGGCGAGTCAGGAGACTGGCACGTTATAATGGCCTGTAGGGACTTCCTCAAGGCTGAAAAAGCAGC
AAAATCACTTGGCATTCCGAAGGAAAATTACACTGTCATGCATCTGGATCTCGCT
Unigenes |
Current Unigene builds | |||||
[SGN-E270936] | SGN-U578669 | Tomato 200607 | Build 2 | 80 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T84692 [Download] [View] | Facility Assigned ID: TGFAX66TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.965 | Expected Error Rate: 0.0071 | Quality Trim Threshold: 14.5 |