EST details — SGN-C65057
Search information |
Request: 65057 | Match: SGN-C65057 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C65057 | Clone name: cLEM-8-D15 |
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Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178248 is on microarray TOM1: SGN-S1-1-3.3.4.7
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C178248 [TUS-28-K14] | Trace: SGN-T183441 | EST: SGN-E370251 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E271845 | Length: 467 bp (974 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E271845 [] (trimmed)
GCTATCAAGACTAATGTAGTTGGTACTTTGAACATGCTGGGATTGGCTAAAAGAGTCGGTGCGAGGTTTTTGCTAACCAGCACTAGCGAAGTATA
TGGTGATCCTTTAGAACATCCACAGAAGGAGACATACTGGGGCAATGTTAATCCTATTGGTGTCCGAAGTTGCTACGATGAGGGAAAACGAACAG
CTGAAACATTGACAATGGATTATCACAGAGGTGCAGAAGTTGAGGTGAGAATCGCTAGGATCTTTAACACTTATGGACCTCGTATGTGTATTGAT
GACGGTCGCGTTGTCAGCAACTTTGTCGCTCAGGCTTTAAGGAAAGAGCCTTTGACAGTTTATGGTGATGGGAAACAAACAAGAAGTTTCCAATT
TGTTTCAGATCTGGTTGAAGGCTTAATGCGGTTGATGGAAGGAGAACATGTCGGACCCTTCAACCTCGGAAACCCTGGTGAATTCAC
TGGTGATCCTTTAGAACATCCACAGAAGGAGACATACTGGGGCAATGTTAATCCTATTGGTGTCCGAAGTTGCTACGATGAGGGAAAACGAACAG
CTGAAACATTGACAATGGATTATCACAGAGGTGCAGAAGTTGAGGTGAGAATCGCTAGGATCTTTAACACTTATGGACCTCGTATGTGTATTGAT
GACGGTCGCGTTGTCAGCAACTTTGTCGCTCAGGCTTTAAGGAAAGAGCCTTTGACAGTTTATGGTGATGGGAAACAAACAAGAAGTTTCCAATT
TGTTTCAGATCTGGTTGAAGGCTTAATGCGGTTGATGGAAGGAGAACATGTCGGACCCTTCAACCTCGGAAACCCTGGTGAATTCAC
Unigenes |
Current Unigene builds | |||||
[SGN-E271845] | SGN-U582988 | Tomato 200607 | Build 2 | 24 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T85396 [Download] [View] | Facility Assigned ID: TGFBE20TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.976 | Expected Error Rate: 0.0080 | Quality Trim Threshold: 14.5 |