EST details — SGN-C65254

Search information 
Request: 65254Match: SGN-C65254
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C65254Clone name: cLEM-8-M19
cartOrder Clone
Library Name: cLEMOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit
Development Stage: immature green fruit

Microarray: Alias clone SGN-C178365 is on microarray TOM1: SGN-S1-1-6.4.4.8
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178365 [TUS-28-P11] Trace: SGN-T183604 EST: SGN-E371244 Direction: 3' Facility: INRA
Clone: SGN-C178365 [TUS-28-P11] Trace: SGN-T183605 EST: SGN-E371245 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E271950Length: 616 bp (835 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E271950 [] (trimmed) TGGAATGTCTGGATTTCGGCATATGCCAGGAGTGGACAAGGTGAGGCTGCATTGCGGACTTTTGATAGGATGATTGAAAAAGACTTAAAGCCTGA
TCATGTTACTCTCCTTGGTGTTTTATGCGCTTGCTGTCACCAAGGTTTTGTGGAGGAAGGTAGAAGGCTGTTCTCAAGCATGATAAATCAGTTTG
GATTGCAGCCAAAGATTGTGCATTATGGGTGTATGATTGATTTACTTGGACGTGGTGGGTTCTTGGATGAAGCTATGGAAATTATTCATTCTATG
AAACTAAAGCCAGATGCAATAATATGGAGGACACTACTTGGTGCATGCAGATTTCATGGAAGAGAAGAACTTGGTGAATTTGCTTTCCATAAGCT
TCTGGAGCTGGAACCAACGAATGGGGAAAACTACGTGTTAATATCAAATGTTCATACTCAAAAAAAGAAATGGACTGAAGTTGGAGAAGTCAGGG
AGCTGATGGACAGCAGTGGTATTAAAAAGATTCCTGGATGCAGTTCAATTGAACTAGAAAATGCAGTTTATGAGTTTAAGGCATCTGATCCACTT
AAAACAGGGAATGAAGAAATACATAAGATGTTGCAAGACATGAAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E271950] SGN-U582749 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T85501 [Download] [View] Facility Assigned ID: TGFBC82TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.950 Expected Error Rate: 0.0067 Quality Trim Threshold: 14.5