EST details — SGN-C65284
| Search information |
| Request: 65284 | Match: SGN-C65284 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C65284 | Clone name: cLEM-8-N5 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178387 is on microarray TOM1: SGN-S1-1-8.1.4.17
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178387 [TUS-29-A9] | Trace: SGN-T183750 | EST: SGN-E370409 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178387 [TUS-29-A9] | Trace: SGN-T183751 | EST: SGN-E370410 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E272042 | Length: 505 bp (995 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E272042 [] (trimmed)
GGAGTTCGCCATGGAAGGAGCTTTCTCAATCAAGTCTGATGTCTTCAGCTTTGGAGTCTTAATGCTGGAAATTTTGAGTGGTAGGAGAAATGCTA
GCTTACAACAATTCAATCGTCCGCTCAACTTAATAGGTTATGCATGGGAACTATGGAAAGAAGGGTGTGGACTAGAACTGAAGGATCCAGCTCTT
GAAGATCTTTACGACACTGAACAATTTTTACGAGTTATACATGTCGGACTATTATGTGTACAAGAAGGAGCAACAGATAGGCCAACAATGTCTGA
TGTTATCTCAATGCTTGGTAATGGAAGTATGTCACTGCCAATCGCAAAACAACCTGCATTTTTCACAGGAAGAGACGAAGCTGAATCATATTCGT
CATCAAACAAAACAGAACAATGTTCAATTAATGATTGTTCCATTACTGTCATTGAAGCAAGATAAGACTAGAGATGTTATTTTGTTGTAATAAAG
ATTGGATATATAACCAAAGTTGTAATGACC
GCTTACAACAATTCAATCGTCCGCTCAACTTAATAGGTTATGCATGGGAACTATGGAAAGAAGGGTGTGGACTAGAACTGAAGGATCCAGCTCTT
GAAGATCTTTACGACACTGAACAATTTTTACGAGTTATACATGTCGGACTATTATGTGTACAAGAAGGAGCAACAGATAGGCCAACAATGTCTGA
TGTTATCTCAATGCTTGGTAATGGAAGTATGTCACTGCCAATCGCAAAACAACCTGCATTTTTCACAGGAAGAGACGAAGCTGAATCATATTCGT
CATCAAACAAAACAGAACAATGTTCAATTAATGATTGTTCCATTACTGTCATTGAAGCAAGATAAGACTAGAGATGTTATTTTGTTGTAATAAAG
ATTGGATATATAACCAAAGTTGTAATGACC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E272042] | SGN-U581100 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85593 [Download] [View] | Facility Assigned ID: TGFBE75TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0123 | Quality Trim Threshold: 12.5 |
Working
