EST details — SGN-C69335
| Search information |
| Request: 69335 | Match: SGN-C69335 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C69335 | Clone name: cLEN-9-M9 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C180771 is on microarray TOM1: SGN-S1-1-8.4.17.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180771 [TUS-35-D17] | Trace: SGN-T1645 | EST: SGN-E378711 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C180771 [TUS-35-D17] | Trace: SGN-T196376 | EST: SGN-E395050 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E275087 | Length: 474 bp (858 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E275087 [] (trimmed)
TCATATTGAGATTTTTAGAAATTATTCTAATCATTCACAGTGCAAAAGAAGATGGAAAGCCCTAGAGTTGAGGAGAGTTATGACAAAATGAGTGA
ATTAAAAGCGTTTGATGATACTAAGGCCGGTGTTAAAGGACTTGTTGATTCTGGAATTACTAAAGTACCTCAAATATTCGTTCTACCGCCAAAAG
ACAGGGCTAAAAAATGTGAAACACATTTCGTTTTTCCAGTGATAGACCTTCAAGGTATCGATGAGGATCCGATTAAGCATAAGGAGATAGTGGAC
AAAGTTCGAGATGCATCGGAGAAATGGGGTTTTTTTCCAAGTGGTTAATCATGGGATTCCAACATCCGTCTTGGACAGAACGTTGCAAGGAACAC
GACAGTTCTTTGAGCAAGATAACGAGGTTAAGAAACAGTATTACACTCGAGATACTGCGAAAAAAGTGGTTTATACTAGCAATCTTGATTTGTA
ATTAAAAGCGTTTGATGATACTAAGGCCGGTGTTAAAGGACTTGTTGATTCTGGAATTACTAAAGTACCTCAAATATTCGTTCTACCGCCAAAAG
ACAGGGCTAAAAAATGTGAAACACATTTCGTTTTTCCAGTGATAGACCTTCAAGGTATCGATGAGGATCCGATTAAGCATAAGGAGATAGTGGAC
AAAGTTCGAGATGCATCGGAGAAATGGGGTTTTTTTCCAAGTGGTTAATCATGGGATTCCAACATCCGTCTTGGACAGAACGTTGCAAGGAACAC
GACAGTTCTTTGAGCAAGATAACGAGGTTAAGAAACAGTATTACACTCGAGATACTGCGAAAAAAGTGGTTTATACTAGCAATCTTGATTTGTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E275087] | SGN-U580508 | Tomato 200607 | Build 2 | 40 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T88959 [Download] [View] | Facility Assigned ID: TRRBG77TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.957 | Expected Error Rate: 0.0051 | Quality Trim Threshold: 14.5 |
Working
