EST details — SGN-C69781
| Search information |
| Request: 69781 | Match: SGN-C69781 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C69781 | Clone name: cLER-12-J15 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185993 is on microarray TOM1: SGN-S1-1-2.2.7.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185993 [TUS-48-N7] | Trace: SGN-T192567 | EST: SGN-E391241 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185993 [TUS-48-N7] | Trace: SGN-T192809 | EST: SGN-E391483 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E283304 | Length: 625 bp (889 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E283304 [] (trimmed)
CATTAACGAACCAAATCACCAAAACCTAAAGGAGAAAAATGGCAGCTTCGAGCATTGGGCATCAGATTCATATTAATGTCAATTCTCCAATTCTT
CTTCCTTTGAGAACCAATTTCAGTTCACTCTCTTTCACTTTCTCTAATGCTAGATACCCATTAAAATGGAATCACATTGGTTGCCCCAAAATTTG
TGCTCTACCAGCTGTTTCAATAATTGCTTCTGGAAGTTCTAGAGAGATGCTTCCTCCTGCCCTTGATTCCTCTTCAGAGCCACCAGCAATCTTTG
ATGGAACTCCAAAGCTTTATATCTCTTACTCATGCCCATATGCCCAACGTACGTGGATTGCTAGAAATTGTAAGGCGCTGCAGGAAGAGATTAAG
TTGGTTCCTATTGATCTAAAGAACAGGCCAGATTGGTATAAGGAGAAGGTTTATCCAGCAAATAAGGTACCATCACTGGAACACAACAATGAAGT
TAAGGGAGAGAGTATGGATCTCATTAGATATATTGACAGTAACTTTGAAGGGCCATCACTTTTCCCTGATGATCCTTCCAAGAGAGAATTCGCAG
AAGAATTATTCTCCTACTTTGACTCCTTTTACAAAGCTGTAATTTCGTCTTTAAA
CTTCCTTTGAGAACCAATTTCAGTTCACTCTCTTTCACTTTCTCTAATGCTAGATACCCATTAAAATGGAATCACATTGGTTGCCCCAAAATTTG
TGCTCTACCAGCTGTTTCAATAATTGCTTCTGGAAGTTCTAGAGAGATGCTTCCTCCTGCCCTTGATTCCTCTTCAGAGCCACCAGCAATCTTTG
ATGGAACTCCAAAGCTTTATATCTCTTACTCATGCCCATATGCCCAACGTACGTGGATTGCTAGAAATTGTAAGGCGCTGCAGGAAGAGATTAAG
TTGGTTCCTATTGATCTAAAGAACAGGCCAGATTGGTATAAGGAGAAGGTTTATCCAGCAAATAAGGTACCATCACTGGAACACAACAATGAAGT
TAAGGGAGAGAGTATGGATCTCATTAGATATATTGACAGTAACTTTGAAGGGCCATCACTTTTCCCTGATGATCCTTCCAAGAGAGAATTCGCAG
AAGAATTATTCTCCTACTTTGACTCCTTTTACAAAGCTGTAATTTCGTCTTTAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E283304] | SGN-U570711 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T94271 [Download] [View] | Facility Assigned ID: TPRBU56TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0058 | Quality Trim Threshold: 14.5 |
Working
