EST details — SGN-C69853
| Search information |
| Request: 69853 | Match: SGN-C69853 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C69853 | Clone name: cLER-12-M6 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185995 is on microarray TOM1: SGN-S1-1-8.2.7.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185995 [TUS-48-N9] | Trace: SGN-T1920 | EST: SGN-E378656 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C185995 [TUS-48-N9] | Trace: SGN-T192568 | EST: SGN-E391242 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185995 [TUS-48-N9] | Trace: SGN-T192810 | EST: SGN-E391484 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E283407 | Length: 417 bp (899 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E283407 [] (trimmed)
TAAAAAAAAAAAAAACATTTTATAGCTAAGTAAGTAAACGCAATGGCTTCCTCAATTGTCTCATCGGCAGCCGCTGCTACCCGTAGCAATGTTGC
TCAAGCTAGCATGGTCGCACCCTTCACCGGACTCAAATCCGCCGCTTCTTTTCCCGTTACCAAGAAGAACAACAACGTTGACATTACCTCCCTTG
CTAGCAATGGTGGACGCGTTAGATGCATGCAGGTTATTCAAAAATAAGTGATTCAATTATCAGTATGTATATATAATTTAAATTCAACGCGATTA
TTTTATAATCGTGGAATGTTTGACTAATGTAGGTGTGGCCACCAATCAACATGAAGAAATACGAGACATTGTCATACCTTCCTGACTTGTCCGAT
GAGCAATTGCTTAGCGAAAATGAGTATCTTTTGAAAA
TCAAGCTAGCATGGTCGCACCCTTCACCGGACTCAAATCCGCCGCTTCTTTTCCCGTTACCAAGAAGAACAACAACGTTGACATTACCTCCCTTG
CTAGCAATGGTGGACGCGTTAGATGCATGCAGGTTATTCAAAAATAAGTGATTCAATTATCAGTATGTATATATAATTTAAATTCAACGCGATTA
TTTTATAATCGTGGAATGTTTGACTAATGTAGGTGTGGCCACCAATCAACATGAAGAAATACGAGACATTGTCATACCTTCCTGACTTGTCCGAT
GAGCAATTGCTTAGCGAAAATGAGTATCTTTTGAAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E283407] | SGN-U577820 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T94374 [Download] [View] | Facility Assigned ID: TPRBT75TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0140 | Quality Trim Threshold: 14.5 |
Working
