EST details — SGN-C69868
| Search information |
| Request: 69868 | Match: SGN-C69868 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C69868 | Clone name: cLER-12-N20 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184407 is on microarray TOM1: SGN-S1-1-4.4.16.3
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184407 [TUS-44-L5] | Trace: SGN-T198310 | EST: SGN-E396984 | Direction: 5' | Facility: INRA |
| Clone: SGN-C184407 [TUS-44-L5] | Trace: SGN-T199981 | EST: SGN-E398655 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E283331 | Length: 558 bp (976 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E283331 [] (trimmed)
AAAATTCTCCATTTTTTTTTCTTTCCAATTTTTGGAGAGAAAATCCAGCTAGGGAATGCAGAGAGATGAGAGGCTCTCGATTTTCTAACCCCCTT
TTTTACGCCGGAAAAATCCAAAAATCAGTCGCCGGCGGCAGGAATTGCCACCGGAAACACGTAGAAGACGGGTGAATCACTCACCCGTTTTCGTC
TTCCCCGGTTCACCAAATCCCTTTTTAATAACAGGTTCAAACACCCTTTTCAATCTTTAGTCTCTTTTTTTTCAATCAATTTAGAACCAAACAAA
AAAAAAATGGCCCCTGAAGAGAAATGTGGAGCTTTGAACGGAAAATATGAACTCGGTCGACTTTTAGGCCATGGAACATTCGCGAAAGTTTATCA
CGCTCGAAACGTGAAGAATGGTAAAAATGTTGCCATGAAAGTAGTGGGGAAAGAAAAAGTTATTAAAGTAGGTATGATGGATCAGATCAAGCGAG
AAATCTCGGTTATGAAAATGGTGAAAAACCCAAACATAGTCGAGCTCCACGAAGTCATGGCGAGTAAAACAAAGATTTACTTC
TTTTACGCCGGAAAAATCCAAAAATCAGTCGCCGGCGGCAGGAATTGCCACCGGAAACACGTAGAAGACGGGTGAATCACTCACCCGTTTTCGTC
TTCCCCGGTTCACCAAATCCCTTTTTAATAACAGGTTCAAACACCCTTTTCAATCTTTAGTCTCTTTTTTTTCAATCAATTTAGAACCAAACAAA
AAAAAAATGGCCCCTGAAGAGAAATGTGGAGCTTTGAACGGAAAATATGAACTCGGTCGACTTTTAGGCCATGGAACATTCGCGAAAGTTTATCA
CGCTCGAAACGTGAAGAATGGTAAAAATGTTGCCATGAAAGTAGTGGGGAAAGAAAAAGTTATTAAAGTAGGTATGATGGATCAGATCAAGCGAG
AAATCTCGGTTATGAAAATGGTGAAAAACCCAAACATAGTCGAGCTCCACGAAGTCATGGCGAGTAAAACAAAGATTTACTTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E283331] | SGN-U570106 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T94298 [Download] [View] | Facility Assigned ID: TPRBV82TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.960 | Expected Error Rate: 0.0043 | Quality Trim Threshold: 14.5 |
Working
