EST details — SGN-C70698
Search information |
Request: 70698 | Match: SGN-C70698 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C70698 | Clone name: cLER-15-K10 |
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Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178790 is on microarray TOM1: SGN-S1-1-5.2.3.16
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C178790 [TUS-30-B4] | Trace: SGN-T184906 | EST: SGN-E372114 | Direction: 3' | Facility: INRA |
Clone: SGN-C178790 [TUS-30-B4] | Trace: SGN-T184907 | EST: SGN-E372115 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E282657 | Length: 413 bp (897 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E282657 [] (trimmed)
CCTTAATCCTCTCCACCGGCGAACCGGCGAAGATCAAAACGATGTCGGACGAAGAGCACCACTTCGAATCCAAGGCCGATGCCGGAGCTTCAAAG
ACGTATCCTCAACAAGCTGGTACTATTCGTAAAGGTGGTCACATCGTCATAAAAAATCGGCCTTGCAAGGTGGTTGAAGTTTCAACTTCCAAGAC
AGGCAAGCACGGTCATGCTAAATGTCACTTCGTGGCAATTGACATTTTCACTGGAAAGAAACTTGAGGATATTGTTCCCTCTTCTCACAATTGTG
ATGTTCCTCATGTGAATAGGACTGATTATCAACTTATTGATATCTCTGAGGATGGCTCTGTGAGTCTGTTGACTGAAAATGGTAACACCAAGGAT
GACTTGAGACTCCCAACTGATGATACTCTTCTG
ACGTATCCTCAACAAGCTGGTACTATTCGTAAAGGTGGTCACATCGTCATAAAAAATCGGCCTTGCAAGGTGGTTGAAGTTTCAACTTCCAAGAC
AGGCAAGCACGGTCATGCTAAATGTCACTTCGTGGCAATTGACATTTTCACTGGAAAGAAACTTGAGGATATTGTTCCCTCTTCTCACAATTGTG
ATGTTCCTCATGTGAATAGGACTGATTATCAACTTATTGATATCTCTGAGGATGGCTCTGTGAGTCTGTTGACTGAAAATGGTAACACCAAGGAT
GACTTGAGACTCCCAACTGATGATACTCTTCTG
Unigenes |
Current Unigene builds | |||||
[SGN-E282657] | SGN-U578904 | Tomato 200607 | Build 2 | 59 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T95177 [Download] [View] | Facility Assigned ID: TPRCF65THB |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.981 | Expected Error Rate: 0.0198 | Quality Trim Threshold: 12.5 |